Guillardia theta: GUITHDRAFT_96054
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Entry
GUITHDRAFT_96054 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_96054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_96054
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GUITHDRAFT_96054
Spliceosome [BR:
gtt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
GUITHDRAFT_96054
Complex C
U5 SnRNP specific factors
GUITHDRAFT_96054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DDX23
ResIII
CatAgl_D1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
17298025
NCBI-ProteinID:
XP_005828367
JGI:
Guith1_96054
UniProt:
L1IZ87
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MLQRQKMMEQLRRDRDRDGREREREREREREREKAKAENKDDKDAENAETLISQKELEQV
QKRYLGGAKVKKKVVKVTDKFRFAFDWEATEDTSADVNPLYNKKHEAQLLFGRGLRAGID
MREQKKNSTYVENLEAVRAKIAEEDVDAEQAEEYRKHQEEMKMKMKEAYASRAKASLDRN
MALPGKHWMDKKLTDMTERDWRIFREDFQIATRGGKPCNPIRNWEESGLPPEILEAIKEK
KYKIPSPIQMQCIPLGLLNRDVVGIAQTGSGKTAAFVLPMLVYISKQPPITQDTAPEGPL
ALILAPTRELANQIYDEAITFCKFMNIRCFPLVGGGGVKSIEEQGFTVRQGVEILVATPG
RLIDCLERRLVVLNQCNYVVLDEADRMIDMGFEPQVQAILDAMPSSNLKPEDDAAEEGNQ
EFRYRQTFMFSATMPPAIERITRKYLRRPAFVTVGEAGQTASTVEQHFIFCSENQKNARL
LDLLARGKPPIMVFVNARKNCDVLHKELSSRGHRVTLLHGGKSQEGREEALDSFKSGHYD
IMVCTDVAGRGIDISGVEHVVNFDCPKNIEDYTHRIGRTGRAGKSGVATTILTPEDTHIY
YDLKEKLQESNQNVPREILSHPAAQQKPGAVPQKPRQQVQYVDVEAGRRGGPRN
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaggcagaagatgatggagcagctgcgccgtgacagagacagagacggcaga
gaaagagagagagagagggagagggagcgggagcgggagaaggcaaaggcagaaaacaaa
gatgataaagacgccgagaatgcagaaactctgatctcgcagaaggagcttgaacaagtt
cagaagagatatctaggaggagcaaaggtcaagaagaaggtcgtgaaggtgacggacaaa
ttccgtttcgccttcgactgggaggcaacggaagacacttcagctgacgtgaaccctctc
tacaacaagaagcacgaggcgcagcttttgttcggacgcggtttgcgcgctggtattgac
atgcgtgagcaaaagaagaattcgacatacgttgagaacctcgaggcggtgcgagccaag
atcgcagaggaagatgtcgatgctgagcaagcagaggagtacagaaagcatcaagaggag
atgaagatgaagatgaaggaagcgtacgcgtctcgtgccaaggcgagcctggacaggaac
atggcgctgccaggaaagcattggatggacaagaagctaacggacatgacggagagagac
tggagaatcttccgcgaagactttcagatcgcaactcgaggaggtaaaccttgcaacccc
atccgcaactgggaggagagtggactaccgcctgagatcctcgaggcgatcaaggagaag
aagtacaagattccttctcccatccaaatgcagtgcatccctctcggcctcctcaacagg
gacgtggtcggcatcgctcagacaggctccggtaagactgccgccttcgtgcttcccatg
ctcgtctacatctccaagcagccgcccatcactcaagacacggcgcctgaagggcctctc
gcgctcatcctcgctcccacccgcgagctggcgaaccagatctacgacgaggccatcacg
ttctgcaagttcatgaacatccgctgcttcccgctggtgggcggaggaggcgtcaagagt
atcgaggagcagggcttcaccgtcaggcagggagtagagatcctcgtcgctactcctgga
cgtctcatcgactgcttggagagacgcctggtagtgctcaaccagtgcaactatgtcgtg
cttgatgaggccgatcgcatgatcgacatgggcttcgagccccaggtgcaggcgatcctc
gacgccatgccaagctccaacctcaagcccgaggacgacgctgcggaggaaggaaaccaa
gagttcaggtacaggcagacgttcatgttctctgctaccatgccgcccgccattgagcgc
atcacgaggaagtacctgaggaggccggcgtttgtgacggtaggagaagccggtcagacg
gcttctacagtcgagcagcacttcatcttctgctcggagaaccagaagaacgctcgcctc
ctcgacctcctcgcgcgaggaaagcctcccattatggtgtttgtgaacgcgcgcaagaac
tgcgatgtgcttcacaaggagctgagctccaggggccatcgagtgactctgctgcacggt
ggcaagtcgcaggagggacgcgaggaggcgctggactcgttcaagagcggccactacgac
atcatggtctgtacggacgttgctggacgcggcatcgacatctcaggggtggagcatgtg
gtgaatttcgactgtcccaagaacatcgaggactacacgcatcgcatcggaaggacagga
cgagcaggcaaatcgggagtggcgacgacgatcctgaccccggaagacacgcacatctac
tacgacctcaaggagaagcttcaggaaagcaaccagaacgtaccacgagagatcttgtcg
catcctgccgctcagcagaaaccaggagccgttcctcagaagccgcgtcagcaagttcag
tacgtggatgtggaagctgggcggagaggaggaccgcggaattga
DBGET
integrated database retrieval system
