Guillardia theta: GUITHDRAFT_98483
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Entry
GUITHDRAFT_98483 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_98483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_98483
03009 Ribosome biogenesis [BR:
gtt03009
]
GUITHDRAFT_98483
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GUITHDRAFT_98483
Spliceosome [BR:
gtt03041
]
Complex A
U2 snRNP components
U2 related factors
GUITHDRAFT_98483
Complex B
GUITHDRAFT_98483
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
GUITHDRAFT_98483
Ribosome biogenesis [BR:
gtt03009
]
Eukaryotic type
90S particles
Helicases
GUITHDRAFT_98483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
17289625
NCBI-ProteinID:
XP_005819869
JGI:
Guith1_98483
UniProt:
L1IAG6
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MLLREAMNDPLLERYSCVVLDEAHERTVSTDVLFGLIKQVVSQRKDMKLIVMSATLDAGK
FQQYFNDCPRVDVPGRTFPVEIFYTQEAERDYLEAAIRTAVQIHLCEPPGDILLFLTGED
EIEQACAKIDAELKGQNDKEVGPVTCVPLYSALPPHEQQKVFDPAPPPKFPGGPAGRKIV
VSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVTAISQASANQRAGRAGRTRP
GKCFRLYTQKAFHKELQEQTYPEMLRSNLGSVVLTLKKLGIDDLVHFDFMDPPAPETLMR
ALELLNYLGALNDDGDLTELGATMAEFPLDPQLAKMLVASPQYNCSNEILSIAAMLSSPN
IFMRPKQAQRAADEAKARFSHVDGDHLTLLNAYYAWKSNGEDKKWTYDNFLNFRSLQSGD
SVRQQLARLMAKYNLPLTSTEFNSKDYYVNIRKSLVSGFFMQVAHLDPSGHYQTVKDNQP
VALHPSCCLDHKPEWCLYHEFTLTTKQFIRTVTEVKGEWLVDIAPQYYDLRNFPQSGAKR
ALEKIVARRKANA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcagagaagccatgaacgaccctctcctcgagcgctactcgtgtgttgtgctg
gacgaggcccacgagaggacggtctcgacagatgtcctcttcggcctcatcaagcaggtt
gtcagtcagaggaaggacatgaagctgattgtcatgagtgccactctggatgctggcaag
ttccagcagtacttcaacgactgcccaagagtcgatgtccctggacgcactttcccagtt
gaaatcttctacacccaggaagcagagagggactaccttgaagctgccatccgcacagca
gtgcagattcacctctgcgagccaccaggagacattcttctgttcttgacgggtgaagat
gagatcgaacaagcctgtgccaagatcgatgctgagcttaagggtcagaacgacaaggaa
gttggcccagtaacttgcgttcctctttactccgctctcccacctcacgaacaacagaaa
gttttcgatcctgctccaccaccaaagtttccgggaggaccagctggaaggaaaatcgtg
gtttcgaccaacattgcagaaacatccttgacaattgatggaatcgtctatgtgatcgat
cccggattcagcaaacagaaggtgtacaaccccaggattcgagtagaatccttgctcgtc
acggctatctctcaggcaagcgcgaaccagcgagcaggtcgtgcaggacgtacaaggcca
gggaagtgcttccgtctctacactcagaaggcattccacaaggagctgcaggagcagact
taccccgagatgctccgatcgaacttggggtctgttgtgctcaccttgaagaagctgggg
atcgacgatctggtgcatttcgacttcatggatcctccagcccccgagactctgatgaga
gcgctcgagctcctcaactacctcggagctctgaatgacgatggtgaccttactgagctc
ggcgccacaatggctgagtttcctctggatcctcagctggcgaagatgcttgtggcaagc
cctcagtacaactgtagcaatgaaatcctctcgatagctgcaatgctgtcgtcgccaaac
attttcatgaggccaaagcaagcgcagcgagcggcagatgaagcgaaggctcgcttctcg
cacgtggacggagatcatttaaccttgctgaatgcgtattatgcctggaagtcgaatgga
gaagataagaaatggacctacgacaacttcttgaatttccgctcactgcagtcgggtgac
agcgttcgtcagcagctggcacgcttgatggccaagtacaacctacccttgaccagcact
gagttcaacagcaaggactactatgtcaacatccgcaagagccttgtctcgggattcttc
atgcaagttgcacacctagatccatccggccactaccagacggtcaaagacaaccaacct
gtcgcgctccatccctcttgctgtttggaccacaagcccgaatggtgcctctaccacgag
ttcacccttaccaccaagcagttcatccgcacagtgacagaggtcaagggcgagtggctg
gttgacatcgccccacagtactacgacttgagaaacttccctcagagtggagcgaagcga
gcactggagaaaatcgttgctcgtcgcaaggcgaacgcataa
DBGET
integrated database retrieval system
