KEGG   Guillardia theta: GUITHDRAFT_98784
Entry
GUITHDRAFT_98784  CDS       T02925                                 
Symbol
RACK1
Name
(RefSeq) small subunit ribosomal protein RACK1, cytoplasmic
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
gtt  Guillardia theta
Pathway
gtt03010  Ribosome
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    GUITHDRAFT_98784 (RACK1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtt03019]
    GUITHDRAFT_98784 (RACK1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gtt04147]
    GUITHDRAFT_98784 (RACK1)
Messenger RNA biogenesis [BR:gtt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     GUITHDRAFT_98784 (RACK1)
Exosome [BR:gtt04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   GUITHDRAFT_98784 (RACK1)
  Exosomal proteins of colorectal cancer cells
   GUITHDRAFT_98784 (RACK1)
  Exosomal proteins of bladder cancer cells
   GUITHDRAFT_98784 (RACK1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd NBCH_WD40 WDR90_beta-prop_4th DSE1_N TRM82_WD Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ASA1 Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_DCAF12 CFAP251_N Beta-prop_VPS8 PAC11 Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_ACSF4 DUF7165 Cytochrom_D1 PROPPIN Ge1_WD40 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 17288255
NCBI-ProteinID: XP_005818516
JGI: Guith1_98784
UniProt: L1I5M0
LinkDB
Position
Unknown
AA seq 327 aa
MSETLSFRGTLKGHRNWVTAIATTATPTPDTENMLVSASRDKSIIVWTLLREEGNYGVPK
KSLHGHSHFVQDVVVSSDGQFALSGSWDGTLRLWDLNTGATTRRFVGHSKDVLSVAFSID
NRQILSGSRDKTIKLWNTLGDCKYTIGSSSINDEGHSEWVSCVRFSPAPSPPLLVSCGWD
KLVKVWNLTNCKLRTNLVGHTGYLNCVTVSPDGSLCASGGKDGTAKLWDLQEGKHLYSLE
AGDTINALLFSPNRYWLGAATNSSIKIWDLESKNIVADLVPEDVPPTGPKSVKVSCVSMC
WSADGNSLFAGYTDGNIRVFAVTTLGR
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtcggagacgctttccttccgcggaaccctcaagggtcacagaaactgggtgactgcc
atcgctaccactgccactcctaccccagacactgagaacatgctcgtgtctgcctccaga
gacaagtccatcatcgtctggactctcttgagggaggagggcaactacggagttcccaag
aagtcccttcacggtcactcccacttcgtgcaggacgttgttgtttccagcgacggtcag
ttcgccctctcaggatcctgggacggcactctccgcctctgggacctcaacaccggagca
accaccaggaggttcgtgggccactccaaggacgttctgtcagtcgccttctcgattgac
aacaggcagatcctctccggttccagagacaagaccatcaagctttggaacaccctcggt
gactgcaagtacaccatcggctcctcctccatcaacgacgagggtcactccgagtgggtc
agctgcgttcgcttctcccctgccccctccccccccctcctcgtctcctgcgggtgggac
aagctcgtcaaggtctggaacttgaccaactgcaagctccgcaccaaccttgtcggccac
accggctacctcaactgcgtcactgtctctcctgacggctccctgtgcgcctccggagga
aaggacggcactgccaagttgtgggacctccaggagggcaagcacctctactccttggag
gccggagacaccatcaacgctctcctcttcagcccgaacaggtactggctcggagctgct
accaactcttctatcaagatctgggatctcgagagcaagaacatcgttgcggaccttgtc
cccgaggatgttcctcccaccggccccaagtccgtcaaggtctcctgcgtctccatgtgc
tggagcgccgacggcaactccttgttcgccggctacaccgacggaaacatccgcgtgttt
gctgtcaccacccttggaagataa

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