Geotalea uraniireducens: Gura_0578
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Entry
Gura_0578 CDS
T00521
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gur
Geotalea uraniireducens
Pathway
gur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Gura_0578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gur03400
]
Gura_0578
Enzymes [BR:
gur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Gura_0578
DNA repair and recombination proteins [BR:
gur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Gura_0578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
NAT10_TcmA_helicase
AAA_22
SLFN-g3_helicase
nSTAND3
AAA_16
UvrD_C
TraI_hel_assoc_N
Flavi_DEAD
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ABQ24790
UniProt:
A5GCA8
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All DBs
Position
complement(692778..694583)
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AA seq
601 aa
AA seq
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MPVDSLNDIDRHFAAFICRLAGTDDRRLWLAAALVSQAVGSGHVCLDLGSAMASEPATEE
GIGDPAAWGKQLRCWPVIGHPGDFTPLVLDRANRLYLHRYWRYEQQLAAALIRRGAEVPA
AIDEALLKDGVRRLFPAQACGVTDWQRIAALAAVSRRFCVISGGPGTGKTSTVVKVLVLL
LEQAAGEKCRIALAAPTGKAAARLKESILGARGSIDCSDAVRELLPTDVSTLHRLLGFVR
GSSCFRHNRENPLPFDVIVVDEASMVSLPLMAKLVDALADNARLILLGDRDQLASVEAGA
VLGDISNTGAVHGFSRTFCDLAGRISGDPLAAEPYAEEASHRLHDAIVVLRKSYRFAADS
GIGALGNLVNEGNGAAAVALLRGKTFTDIALNGCPPAERLGETLAKSICAGYGPYLKGNG
AGEAHERFGRFRILCALRQGPYGTETVNRLVEAALVREGLINPQGHRWYAGQPVMVTRND
YALQLFNGDIGIILPDPAVDNELRAFFPAADGALRSILPLRLPEHETAYAMTVHKSQGSE
FDRVLLLLPDRQSDVLTRELIYTAITRAKTGVDLWAPDDLLMWAIERRIERKSGLRETLW
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgatagcctgaacgacatagaccgccacttcgccgcgttcatctgccgcctg
gcggggaccgacgaccggcggctgtggcttgccgctgccctcgtcagccaggcggtgggg
agcggtcatgtctgcctcgacctcggctccgccatggcgagtgagccggccacggaggag
gggattggcgatcctgcagcatgggggaaacaactgcgctgctggccggtgatcggccac
cccggcgacttcacccctctcgtcctcgacagggccaaccgcctctatctgcaccgttac
tggcgctatgagcaacaactggccgcggcgctcattcgccggggagcggaagtccccgcc
gccatcgacgaggcgctgctcaaggacggcgtccgacgcctgttcccggcacaagcatgc
ggcgtgaccgactggcagcggatcgcggcactggcagccgtcagccggcgcttctgcgtc
atttcaggaggccccggcacgggaaagacatcgaccgttgtcaaggttctggtcctgctc
ctcgagcaggcggcaggagagaaatgccggatcgcactcgctgcgccgaccggcaaggcg
gcggcacggctcaaggagtcgatcctgggggcgcgaggcagcatcgactgcagcgacgcc
gttcgggaactgctcccgaccgacgtttcgacgctccaccggctcctcggctttgtccgc
ggttcgagctgcttccgccacaaccgggaaaacccgctccccttcgatgtgatcgtcgtc
gatgaagcgtccatggtatcgctcccgctcatggccaaactggtcgatgccctggccgac
aacgcccggctcatccttctcggcgaccgggaccagctcgcctcggtggaagcaggggcg
gtgctgggcgacatcagcaatacaggcgctgttcatggcttttcccgcaccttctgcgat
ctggccgggcggatatccggcgatcccctggcagcagaaccttatgccgaggaggcgtca
caccgtcttcacgatgccatcgtcgtcctgcgcaagagttaccgctttgccgccgacagc
ggcatcggcgccctcggcaacctggtcaatgaagggaacggtgcggcggcagtagcgctc
ctcaggggaaagacgttcaccgacatagccctcaacggatgtccccccgcggaaaggctc
ggcgaaaccctggcgaagagcatctgcgccggctatggaccctacctcaaggggaatggg
gccggcgaggcgcatgagcggttcggtcggttccgcatcctttgcgccctgcgccagggg
ccgtacgggacagagaccgtcaatcgcctggtggaagccgcgcttgtccgggaaggactt
atcaatcctcagggacatcgctggtacgcgggacagccggtcatggtgaccaggaacgac
tatgcgctgcagctcttcaatggcgacatcggcatcatcctgcccgatccggccgtcgat
aacgagctgcgtgcattctttcccgccgctgacggcgcgttgcggtcgatcctgccgctt
cgcctgccggaacacgaaaccgcctatgccatgaccgttcacaaaagccagggttccgaa
ttcgaccgggtgctgctcctcttgccggaccggcagtcggacgttctcacccgcgaactg
atttatacggccattacccgggcaaagacaggggtagatctctgggcgccggacgatctt
ctgatgtgggcaattgagcggcgaattgagcgaaaatccgggcttcgggagacactctgg
ggataa
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