Geotalea uraniireducens: Gura_0579
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Entry
Gura_0579 CDS
T00521
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
gur
Geotalea uraniireducens
Pathway
gur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Gura_0579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gur03400
]
Gura_0579
Enzymes [BR:
gur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Gura_0579
DNA repair and recombination proteins [BR:
gur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Gura_0579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
ResIII
AAA_11
Biotin_carb_C
Rad26-like_N
Motif
Other DBs
NCBI-ProteinID:
ABQ24791
UniProt:
A5GCA9
LinkDB
All DBs
Position
complement(694745..698002)
Genome browser
AA seq
1085 aa
AA seq
DB search
MNQFDLLHTPLAGRNLIEASAGTGKTFTIAGIYLRLVLERQLAVGDILVVTFTEAATKEL
RERIRERLREAENAFAIGTSSDRLLAGLLESAIDRAAARRLLTTALRSFDEASIFTIHGF
CQRMLQENPFESGSLYDTELVTDQQGLLREIAADYWRINCYDAPGAAVQTALAAGLGPAA
LLKIAGRRAGSPFVTVIPQATFPLLPREGEIDPALLEAWLLALKRGFFDYLAAELPKRKR
RANVRFFEDLLLDLHSALERNGSPLPRLIRERYRAALIDEFQDTDPVQFRIFDAVYPAGD
ETPFFLIGDPKQAIYSFRGADIFAYLEAAADTEQRHTLGENWRSEPALIQAVNGLFESRV
EPFYFDDIHFSRVTPAEREIDLLTMDGKPDPAPFRLWFVNRREAGKPINKGDAWEMLPAA
VAGEIARLLQDGSDGRLLIGERPVAPGDIAVLVRAHRQARLVQQALRQRGIPSVLCSAGN
LFESDEAEEILRFLKAVAEPTNERLLKAALVTDMVGVSGDVLAGLLADENSWETVLAEFR
LYHEIWTGNGCMAMAMRFLAVRRVRSRLLPLPAGERRLTNILHCFETIHEAAGEQNLGLE
GVIAWLAERIAEEPKREEHEIRLETDAQAVQLVTIHKSKGLEYPVVFCPFCWAEFGGKEK
TALFHDEQRTTVVDIGSPDLDAHRRQAAQEGLAESLRLLYVALTRARHRCYLAWGAFKDA
GDSAMHYLLHPEALAVKGQVALSDEAMLDDLRRLAEAAESSIAVLPLPEADGISYTPPAV
EPDVFTCRAFSGAIDQEWRVTSFTAFTTTAGHRPHIQEFPDRDETTLEADTGRLPAEPPP
SGIFAFPKGAAAGIFFHEIFESLDFTAAAETASPLIAELLKKHSFPSDWRETVCSMVNNV
LQTPLIQGKGVFTLADVPLGHRLTELEFFFPLAFISSERLKNVATRWNGMDLPLDMSELF
SRLSFMPVKGMVRGFMDMVFEQGGRYYIVDWKSNHLGNRIEEYGQAQLQREMERNLYPLQ
YLLYTVAFNRYLQLRVDGYDYDRHFGGVYYIFLRGVDAGRGSGSGTFFDRPPRRVIEDLT
EALIQ
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttcgacctcctccataccccgcttgccgggcgcaatctcatcgaggcgagc
gccggcaccggcaagacctttaccattgccggcatctacctgcgccttgtcctggaacgg
cagcttgcggtgggggatatcctcgtcgtgacctttaccgaggcggcgaccaaggaactg
cgcgaacggatcagggagcggttgcgtgaagcggagaacgcctttgccattggtacgagc
agcgaccggcttcttgccggacttttggaaagcgccattgaccgcgccgcggcccggagg
ctgttgaccacggcgctccgctccttcgacgaagcgtcgatctttaccattcacggcttc
tgccagcggatgctccaggaaaaccccttcgagagcggctcgctctacgataccgagctg
gtgacggaccagcagggtcttctcagggagattgccgcggattactggcggatcaactgc
tacgatgcgccgggtgcggcagtacagacagcgctggctgccggcctcggaccggctgcg
ctgctgaagattgccggccgccgggccggctcaccgttcgtcaccgtcattccgcaggcg
acgtttcccttgctccccagggaaggggagatcgatccggcactgcttgaagcctggctc
ctcgccctgaaacgggggttcttcgactacctggccgcagaacttcccaagcggaagcgg
cgagccaacgtccgtttcttcgaggacctcctcctcgatctccattctgctctggaaagg
aacggctcccctctcccccggctcatccgggagcgttaccgggcggcgctcatcgacgag
ttccaggacacggatccggtccagttcaggatcttcgacgccgtctacccggcgggggac
gagaccccctttttccttatcggcgaccccaagcaggccatttacagcttccgcggcgcg
gatatcttcgcctacctggaggcggccgcggacacggaacagcgccataccctcggggaa
aactggcgctcagagccggcattaatccaggcggtcaacgggctgttcgaatcacgtgtt
gagcccttttacttcgatgacatccacttcagccgtgtaaccccggccgagcgggagatc
gatctcctcaccatggacggaaaaccggacccagcccccttccggctctggttcgtcaac
cgcagggaggcggggaaaccgatcaacaagggtgatgcctgggaaatgctccccgctgct
gttgcaggagaaatcgcccggcttttgcaggacgggtcggacgggcggctcctgatcggc
gaacggccggtcgctcccggcgatattgcagtccttgtccgggcccatcgacaggcgcgg
ctcgtccagcaggcgttgcggcagcggggtattcccagcgtgctttgcagcgccggcaac
ctcttcgagtcagatgaagctgaggaaatcctccgtttcctcaaagccgtcgccgaaccc
accaacgaaaggcttctcaaggccgcactggtcaccgacatggtcggcgtttccggtgat
gttctggccggcctccttgccgacgaaaacagctgggagacggttttggcggagttccgc
ctttaccatgagatctggaccggcaacggctgcatggcaatggcaatgcgctttctggcg
gtccgccgggtacggagccgcctgctccctctccctgccggcgaaagacggctgaccaac
atcctgcactgcttcgagaccatccatgaggcagccggcgaacagaacctggggctggaa
ggggtcatcgcctggctcgccgagcggatcgccgaagagccgaaacgggaagagcatgaa
atccgcctggagaccgacgcccaggcagtgcagctggtgaccatccacaagagcaagggg
ctggaataccccgtcgtcttctgtcctttctgctgggccgaattcggcggtaaagagaag
actgccctctttcacgatgagcagcgcacgacggttgtggacatcggctcccccgacctg
gacgcccaccggcgacaggcggcacaagaggggctggcggaaagcctccgtctgctctat
gtggccctcacccgggcccggcaccgctgctacctggcatggggtgcgttcaaggatgcc
ggtgattcggccatgcactacctcctccatccagaggctttggcggtcaaggggcaggtg
gcgctcagcgacgaagcgatgctggatgatctccgccgcctggccgaggccgccgaaagc
agcatagcagtgcttcccctgcccgaagcggacggaatttcttataccccccctgcggta
gagcccgatgtattcacctgccgggccttcagcggcgccatcgaccaggagtggcgggta
accagcttcaccgcctttaccacgacggccggccatcgcccccacatccaggaatttccc
gaccgggacgaaacaacgctcgaagcggatacggggcgcctgccggcggaaccgccacca
tcaggcatttttgccttcccgaaaggggctgcagccggaatctttttccacgagatcttc
gaatcgctcgatttcaccgcggcggcggagacagcgtctcccctcatcgccgagctcctg
aaaaagcacagcttcccttcggattggcgggaaacggtctgctccatggtgaacaacgtg
ctacagaccccgttaatccagggaaaaggcgtgtttaccctggccgacgtaccactcggc
caccggctcacggagctggaattcttcttccccctcgccttcatcagctccgagcggttg
aagaacgtcgcgacgcgctggaacggcatggacctgccgctggacatgtccgagcttttc
agccggctatccttcatgccggtcaaggggatggtgcgcgggttcatggacatggtcttc
gaacagggggggcgctactacatcgtcgactggaaatcgaaccacctggggaaccggatc
gaggagtacggccaggcacagctccagcgggaaatggaaaggaacctctatccgctccag
tacctgctctacaccgtcgcattcaaccgctaccttcagctgcgggtggatgggtacgac
tacgaccgccacttcggcggggtctactacatcttcctgcgcggggtcgatgcggggcgc
gggtcggggtccggcactttcttcgatcgtccgccgcgcagagtcatcgaggatttgacg
gaggcactgattcagtag
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