Geotalea uraniireducens: Gura_0945
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Entry
Gura_0945 CDS
T00521
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
gur
Geotalea uraniireducens
Pathway
gur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gura_0945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gur03019
]
Gura_0945
Enzymes [BR:
gur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Gura_0945
Messenger RNA biogenesis [BR:
gur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Gura_0945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ABQ25151
UniProt:
A5GB95
LinkDB
All DBs
Position
complement(1118831..1120186)
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AA seq
451 aa
AA seq
DB search
MKFTDLNLPEQVLQGIAYTGFTECTPIQEKALPPALAGKDVAGQAQTGTGKTAAFLISLF
TRLLKQEKVGTEHHPRALILAPTRELVVQIEKDAQQLGKHTGFTIQAIYGGVDYMKQKNA
LKEGVDIVIGTPGRLIDYLKQKVYSLKNIEALVIDEADRMFDMGFIADLRFILRRLPPFD
ERQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVIYHVSRKEKFPLLLGL
LRKEGMERTMIFVNTKREAEFLFDRLNVNDFPARVISGDVEQRKRLRILEDFKSGKLPIM
IATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISLADEDGALYLED
IHEYIKERIPVEWAEDELFVHDYIRSKPRPKPAAKPHGRAPAPRHGKPAGKHTEKPAEKS
AEKPAGEGEAGEKKRRRRPQKKKPAGEGQPQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaccgatttaaatctgccggaacaggtgctccagggcatcgcctacaccggc
ttcaccgaatgcacacccatccaggaaaaggccctgccgccggccctggcgggcaaggac
gtggcaggccaagcccagaccggcacgggcaagaccgccgcatttctcatctccctcttc
acccgcctcctgaaacaggaaaaagtcggcaccgaacatcacccgcgggcgctgatcctc
gcccccacccgggagctggtggtgcagatcgagaaggacgcccagcagctgggtaaacat
accggcttcaccatccaggccatttacggcggcgtggactacatgaagcagaagaacgcc
ctcaaggagggggtggacatcgtcatcggcaccccgggccggctcatcgactacctgaag
cagaaggtctactccctgaagaacatcgaggcgctcgttatcgacgaggcggaccggatg
ttcgacatggggttcatcgccgacctgcgcttcatcctgcgccgcctccccccattcgat
gagcgccagaacctgatgttctccgccaccctcaaccagcgggtcatggagctggcctac
gagttcatgaacgtgccggaaaaggtcgccgtcaccccggagcagatgaccgccgagcgg
gtcgagcaggtcatctaccacgtgtcgcgcaaggagaagttcccgcttctgttggggctc
ctgcgcaaggaggggatggagcggaccatgatcttcgtcaacaccaagcgggaagcggaa
ttcctctttgaccggctcaatgtcaacgacttcccggcgcgggtcatctcaggcgacgtg
gagcagaggaaacgcctccgcatcctggaagacttcaagagcggtaaactgcccatcatg
atcgccaccgacgtcgcctcccgcggcctccatatcgatggggtctcccacgtcatcaac
tacgacctcccccaggacgcggaggactacgtgcaccgcatcggccgcaccgcccgggcc
ggggccgaagggaaagccatctccctggccgacgaggatggggcgctgtacctggaggac
atccacgagtacatcaaggagaggattccggtggagtgggccgaggatgagctgtttgtc
cacgattacatacggagcaagccgaggccgaaacccgcagcgaaaccccacggcagggct
cccgctccaagacatggcaaaccagcgggaaaacatactgagaagcctgctgaaaagagc
gccgagaaacccgccggcgagggtgaggcaggcgagaagaagcgccgccgccggccgcaa
aagaaaaagccggccggtgaaggacagccccagtag
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