Geotalea uraniireducens: Gura_1632
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Entry
Gura_1632 CDS
T00521
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
gur
Geotalea uraniireducens
Pathway
gur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gura_1632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gur03019
]
Gura_1632
Enzymes [BR:
gur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Gura_1632
Messenger RNA biogenesis [BR:
gur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Gura_1632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrD-helicase
Flavi_DEAD
AAA_22
Shikimate_DH
Rad26-like_C
Motif
Other DBs
NCBI-ProteinID:
ABQ25827
UniProt:
A5GEH2
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All DBs
Position
1894402..1895745
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AA seq
447 aa
AA seq
DB search
MNFQSFDFHPDVAAGVTAAGYASPTPIQAQAIPPVMLGRDVMGLAQTGTGKTAAFALPIL
HRLMQGKQGHVRALIVAPTRELAEQIHESISALGRQTRLRSITVYGGVNINPQIQKLKSG
VEIVVACPGRLLDHIGQGTIDVSRVEVLVLDEADQMFDMGFFPDIRRILKHLPKQRQTLL
FSATMPDEIRRLAHEVLNDPVTVQVGNTAPPVTVSHALYPVEQHLKTPLLLELLRHTDTE
SVLVFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIAA
RGIDVSQISHVVNYDIPDTAEAYVHRIGRTGRAARSGDAFTLVTSEDTAMVRAIERALKS
SLERRTVEGFDYSVPAPKKDTEFVRPPREPQNRKPVAAKKGTAQGSPHNQAGTAKPKATG
RAQQQPGQTAHTAGAPQRRVNRSRRSH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcaatcattcgattttcaccccgatgtagcggccggcgtaacggcagcaggc
tatgccagccccacgccgatccaggcacaggcaattccgccggttatgctcggacgcgat
gtcatgggcctggctcagaccggtaccggcaagacggccgcctttgcattgccgatcctg
caccgcttgatgcaggggaaacagggacacgtccgtgccttgatcgttgcccccactcgc
gagctggcggagcagattcacgagtcgatcagtgctctgggacggcagacccgcctccgc
agcatcaccgtttatggcggtgtcaacattaacccgcagatacagaagctcaaaagcggc
gtcgagattgtcgtggcctgtccggggcggctcctcgaccacatcggccaaggcacgatc
gacgtctcccgggtcgaggtgctggtcctcgacgaggcggatcagatgttcgatatgggc
tttttcccggacatacggcggatactgaaacatctccccaaacagcgtcagaccctgctt
ttttctgccaccatgcccgacgaaatccggcgtctggcccacgaggttctgaacgatccg
gtcacggttcaggttggcaataccgcaccgccggtcacggtcagccatgccctctacccg
gtcgagcagcatctcaagacccccctgctccttgagcttcttcgccataccgacaccgag
tcggtgctggtgttcacccgtaccaagcatcgcgccaagcgcctgggggaacagcttgaa
aaggccggctaccgggccgcatcgttgcaaggcaacctctcacagaaccggcgccaggct
gcgcttgacgggtttcgcgacggcaccttccagatcctggtggcgaccgacattgctgcg
cgaggtattgacgtttcccagatctcccatgtggtcaactacgacattcccgacacagca
gaggcttacgtccaccgtatcggacggaccggccgcgctgcccgcagcggcgatgccttc
accctggtgaccagtgaggatacagccatggttcgcgccatcgaacgcgccttgaaaagt
tccttggagcgccgcaccgtggaaggattcgactacagtgtgcctgcgccgaagaaggat
accgagttcgtccgcccgccgcgcgaaccgcagaaccgtaaacccgtcgcagcaaagaag
ggtactgcacaaggctcaccccataaccaggctggtacggccaagccgaaagccaccgga
cgcgcgcaacagcagcccggccagaccgcccatactgccggtgcgccgcagcggcgcgtc
aatcgttctcgccgcagccactga
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