Geotalea uraniireducens: Gura_3902
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Entry
Gura_3902 CDS
T00521
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gur
Geotalea uraniireducens
Pathway
gur03030
DNA replication
gur03410
Base excision repair
gur03420
Nucleotide excision repair
gur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gura_3902
03410 Base excision repair
Gura_3902
03420 Nucleotide excision repair
Gura_3902
03440 Homologous recombination
Gura_3902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gur03032
]
Gura_3902
03400 DNA repair and recombination proteins [BR:
gur03400
]
Gura_3902
Enzymes [BR:
gur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gura_3902
DNA replication proteins [BR:
gur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Gura_3902
DNA repair and recombination proteins [BR:
gur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Gura_3902
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gura_3902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABQ28051
UniProt:
A5G8D3
LinkDB
All DBs
Position
complement(4553088..4555766)
Genome browser
AA seq
892 aa
AA seq
DB search
MMSEKPTIYLIDGSSYIYRAYYAIRHLSSPKGFPTNALYGFIQMLLKVIKEKKPDHLAVI
FDAGRQTFRNEIYADYKANRAAMPDDLRQQIEPIKEAVRAFNIPALELAGFEADDIIGTI
ARDCEEKGMAAVVVTGDKDLMQIVSDNVTLLDTMKDKVSGPAEVVERFGVGSERVIDILG
LAGDSSDNIPGVPGIGEKTAIKLVNDFGSLDELLARANEVKGKTGERLQEFAEQARLSRR
LATIDCHVPLAWSYDDFAASPQDNRRLAELFKEYGFTTLMKELTSEATLSAEDYRTVLSS
DDFTALVRQLTAVRAFAVDLETTSLNPLEAEIVGISFSFREHEAYYIPVGHRYPGAPHQL
SRDDVLGALKPLLLDPEKHKIGQNIKYDYQVLRRAGIDMQGIWCDTMLASYLLNPTRTSQ
GLDSLAVEFLDHRMISYAEVAGKGKEQKNFAQVEVEKASVYSCEDADATYLLHKLFLPRL
AESGMERLFFELEMPLVKILAEMELYGVKLDLPLLQRLSDGFGGQLADLEREIFALAGGE
FNVNSPKQLGEVLFERLQLQVGKKTKTKTGWSTNVDELERLAGEHEIARLILQYRSLSKL
KSTYTDALPKLVDAASGRVHTSYNQAVTNTGRLSSSEPNLQNIPIRSEEGRSIRHAFIAA
EGCLLLSADYSQIELRVLAHLSADRVFCDAFARDEDIHTRTAAEVFGLFPQMVTQEMRRQ
AKTINFGVIYGQGAFSLARELGVSTKVAKEFIDNYFARHAGARTFLDGCVREAEDNGYVT
TILGRRLPIPDIKSSNGNIRAFAQRNAVNYPIQGSAADIIKQAMVRVVDRMEREGMKSRL
IMQVHDELVFEVPEEEKLAMEMLVKHEMEHAVTLRVPLRVDMNFGRNWSEAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggaaaaaccaaccatctatctcatcgacggctcatcatacatctaccgggct
tactatgcgattcgccatctttcttcgccgaaagggttccccaccaatgcgctctatggc
ttcatccagatgcttttgaaggtgatcaaggagaaaaaaccggaccatctcgccgtgatt
ttcgacgccggccggcagaccttccgcaacgaaatctatgccgactacaaggcaaaccgc
gctgccatgcctgacgacctgcggcagcagattgagccgatcaaggaggcggtgcgggct
ttcaacatcccggcgctcgagttggccggtttcgaggccgacgacattatcggcaccatc
gcccgcgattgtgaagagaaggggatggccgcggtggtagtgaccggcgacaaggatctg
atgcagatcgtcagcgacaacgtcacgcttctggataccatgaaggacaaggtttcgggg
cctgccgaggtggttgagcggttcggagttggttctgagcgggttatcgacatcctcggc
ctggccggcgactcttccgacaatattcccggtgttcccggtatcggcgaaaagacggcg
atcaaactggtaaacgatttcggttcgctggatgagctcctggcgcgggccaatgaggtg
aagggaaagaccggcgagcgtctgcaggaatttgctgagcaggctcgtctctcgcggagg
cttgcaaccatcgattgtcatgtccctttggcctggtcttacgacgactttgccgcgtct
ccgcaggacaaccggcggctggcggaattgttcaaggaatacggattcacgacgctgatg
aaggagttgaccagtgaggcgaccctctcggcggaagattaccggaccgttctctcctcc
gacgatttcacggcccttgtccggcaattgaccgccgtccgggcctttgccgttgacctg
gaaaccacgagtctcaacccgctcgaagcggagatcgtcggcatctccttctctttccgc
gagcatgaggcgtactatatcccggtcggccaccgctatccgggggcgccgcaccagctc
tcccgcgacgatgtactcggagcactcaagccgctactgctcgatccggagaagcacaag
atcggtcagaacatcaagtacgattaccaggtgttgcgccgggccgggatcgatatgcag
gggatctggtgcgacaccatgctcgcctcctatctgctcaacccgacccgcaccagccag
gggcttgattcgctggcagtggaatttctcgatcacaggatgatttcctatgccgaggtg
gccggcaaggggaaggaacagaagaacttcgcccaggtcgaagtggagaaagcgtcggtc
tattcctgcgaagacgccgatgccacctatctcctgcacaagctcttcttgccgaggctt
gccgagtcagggatggaacggctctttttcgagctggagatgccgctggtcaagatcctg
gccgagatggagctgtacggggtaaagctcgacctgccgcttttgcagcgcctctcagac
ggattcggcggccagcttgccgacttggagcgagagatcttcgccctggccgggggagag
ttcaatgtcaactcgccgaagcagctgggggaggtcctttttgagcgcttgcaactgcag
gtcggcaaaaagaccaagaccaaaaccggctggtcgaccaatgtagacgaactggaacgg
ctggccggggagcacgagattgcccggctgatcctccagtaccggagcctgtccaagctg
aagtccacctataccgatgccctgcccaagctcgtcgatgctgcatcggggcgggtccat
acctcttacaaccaggcggtgaccaatacaggtcgactctcttcgtcggagccgaatctg
cagaacatcccgatccgctcggaagaaggtcgcagcatccgccatgccttcattgccgcg
gaggggtgcctcctcctttccgccgactattcacagatcgaactgcgggttctggcccac
ctgtcggcggaccgggtcttctgtgacgcttttgccagggacgaggacatccatacccgg
accgccgccgaagtgttcggcctcttcccccagatggttacccaggagatgcgtcgccag
gccaagaccatcaattttggcgtaatctacggccagggagccttcagcctggccagggag
ctcggcgtatcgacgaaggtggcaaaggaattcatcgacaactactttgcccgtcacgca
ggcgcccggacctttcttgacggctgtgtccgggaggcggaggataatgggtacgttacc
actattcttggccggcgccttcccatcccggatatcaagagttcaaacggcaacattcgg
gcctttgcccagcggaacgccgtcaactatccgatccaggggtcggcggccgatatcatc
aagcaggcgatggtgcgcgtggttgaccggatggagcgggaggggatgaaaagccgtctc
atcatgcaggtccacgacgaattggtgttcgaggtgccggaagaggaaaagctggcgatg
gagatgctcgtgaaacacgaaatggagcacgctgttactctgcgcgtaccgctcagggtg
gatatgaacttcggcaggaactggagcgaggcccactga
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