Geotalea uraniireducens: Gura_4296
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Entry
Gura_4296 CDS
T00521
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gur
Geotalea uraniireducens
Pathway
gur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gura_4296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gur03019
]
Gura_4296
03400 DNA repair and recombination proteins [BR:
gur03400
]
Gura_4296
Enzymes [BR:
gur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gura_4296
Messenger RNA biogenesis [BR:
gur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Gura_4296
DNA repair and recombination proteins [BR:
gur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Gura_4296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ABQ28439
UniProt:
A5G9H1
LinkDB
All DBs
Position
complement(4959834..4961981)
Genome browser
AA seq
715 aa
AA seq
DB search
MYENPQATLLKVFGYNTFRQPQQEIVEGLIRGDDAFVIMPTGGGKSLCYQIPALHRPGVG
IVVSPLISLMKDQVDALRANGVRAAFYNSSLGEVEARRVLAELHNQALDLIYVAPERLMS
EPFLERLKEMEIALFAIDEAHCVSQWGHDFRPEYVQLGRLRRLFPQVPMIALTATADAQT
RGDIIERLGLQGAACHVAGFDRPNIRYTVMEKQKPFVQLTTFLAGRGRDEAGIVYALSRK
RVEEVAERLSAAGIAAAPYHAGLPDRERSRVQEAFQRDELQVVVATVAFGMGIDKPNVRF
VVHYDLPKNIESYYQETGRSGRDGLPAEALLLFGYGDIAVARSLIENGGNAEQNRIELHK
LNAMVGFAEAVTCRRRVLLGYFGATLAEDCGNCDICIKPPERYDATEEAQKALSCVYRVG
QRFGMGHVIDVLRGSHNQRIQTLGHDKLSTYGIGRGLSSDIWGSIFRQLVHLGYLEQDLA
AYSVLKLTAKARPLLRGEERLTLARPRAKAIPVKNAPRTTATGGAYDEGLFQSLRALRKQ
LADDAGVPPFVVFGDATLAEMALARPHDAEALLRISGVGVHKLGRYGADFLAVIREHCGL
APAPLAGVPQAPSVKEGLSDTHLETWRLHQEGLNQDEIAARRGLTAVTVVGHLEALIQAG
KPVDIDRLVAAGHRVMIEAKIREVGSNSPLKAIKDGLPDVISYEEIRLVRACHRQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagaatccacaggcgaccctgcttaaggtctttggctacaacactttccgccag
ccccagcaggagatcgttgaaggactgatccgcggcgacgatgccttcgtcatcatgccg
accggtggcggcaagtcgctctgttaccagatcccggcgctccatcggccgggagtcggg
atcgtggtctcgccgctcatttctctgatgaaggatcaggtggatgccctccgtgccaac
ggcgtgcgcgcagccttttacaattcgtcactaggcgaagtggaggcgcggcgagtgctg
gctgaactgcacaaccaggcgctggacctcatctacgtggcgcctgagcgattgatgtcg
gagccgtttctggaacggctcaaggagatggagattgctctgttcgccatcgacgaggcc
cattgcgtttcccaatgggggcatgatttccgtccggaatacgtgcagctcgggcgtctc
cgccggcttttcccacaggtgccgatgatcgccctgaccgccaccgccgacgcccagacc
aggggggacatcatcgagcgtcttggcctgcaaggggccgcctgccacgtggcgggcttc
gaccgccccaatatccgctatacggtcatggaaaagcaaaagccattcgttcaattgacg
acgtttctggctggacgtgggcgggatgaagccggcatcgtctatgccttgagccgcaag
cgggtggaggaggtggcggaacgcttgtctgctgccggcattgcagccgccccctatcat
gccgggctccctgaccgggagcgctcgcgggttcaggaagcgtttcagcgtgatgaactg
caggtggtggtggcgaccgtggccttcggcatggggatcgacaagcccaatgtccggttt
gtggtccattacgacctgccgaagaacatcgagagctattatcaggaaacaggccgctcc
ggccgcgatggcctcccggccgaggcgttgctcctcttcggttacggcgacattgccgtt
gcccgcagcctcatcgaaaacggcggcaatgcggagcagaaccggatcgagctgcacaag
ctgaacgccatggtcggttttgccgaggcggtaacctgccgccgccgggtgctgctcggc
tatttcggcgcgacactggctgaagactgcggcaactgcgacatctgcatcaagccaccc
gaacggtacgatgccacggaagaggcacagaaggcgctctcctgcgtctaccgggtcgga
cagcgcttcggcatggggcacgtgatcgatgtgctgcgcggttcacacaaccagcgcatc
cagacgcttggccatgataagctctcgacctacggcatcggccggggactctcttccgat
atctgggggagcatttttcgccagctcgtgcatctcggttacctggagcaggaccttgcc
gcgtattcggtgctcaagcttactgcgaaggccaggccgctgttacgcggcgaagagagg
ctgactcttgccaggccgagggccaaggcgataccggtgaaaaatgcgccgcgtaccacc
gcaacgggcggagcatacgacgaagggttgttccagtcactgcgcgccctgcgcaagcaa
ctggcggacgatgccggcgttcctcctttcgtcgtcttcggtgacgccaccctggcggaa
atggccctggcgcgccctcatgatgccgaggccctgctccgcatcagcggagtgggggta
cacaagctggggcgctacggagcggattttcttgcggtaattcgcgagcattgcggtctt
gcaccggcgccgcttgccggcgtgccgcaggcgccgtctgtcaaggaagggctgagtgat
acccacctggaaacctggcgtctccatcaggaggggctgaatcaggatgagattgccgcc
cgccgcggcctgaccgcagttactgtagtcggccacctggaagcgctcattcaggccggt
aaacccgtcgatatcgaccggctggtcgcagccgggcatagggtgatgatcgaggcaaaa
ataagggaggtcgggagcaacagtccgctgaaagcgatcaaagacggcctccccgatgtc
ataagttatgaagagatccggttggtgcgggcctgccatcggcagtga
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