Guyparkeria sp. TX1: VWP12_02840
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Entry
VWP12_02840 CDS
T11928
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
guy Guyparkeria sp. TX1
Pathway
guy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
guy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VWP12_02840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
guy03400
]
VWP12_02840
Enzymes [BR:
guy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VWP12_02840
DNA repair and recombination proteins [BR:
guy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VWP12_02840
Prokaryotic type
VWP12_02840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
DUF5814
Motif
Other DBs
NCBI-ProteinID:
XLZ82095
LinkDB
All DBs
Position
590339..591031
Genome browser
AA seq
230 aa
AA seq
DB search
MTQPALERVQMEPAWREALAPVLLDTPMQQLRERLVEQGKNGTVIHPKPDEWFRAFNHTP
LDQVRVVILGQDPYPTPGHANGLCFSVRPDVRPLPKSLLNIFKELADDLGIQNTNGDLTH
WADQGVLLLNAVLTVASGQPASHQGMGWEALTDRAVRVLAEQPRPIVFVFWGAQAQKKAA
HVHRPEHLVIKSPHPSPLSAYRGFFGSKPFSRINAFLESHGLEPIDWRTG
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagccggccctcgaacgcgtgcagatggagccggcgtggcgcgaggcgctcgcc
ccggtactgctcgatacgcccatgcagcagctgcgcgagcgactggtcgagcagggcaag
aacggcaccgttatccaccccaagcccgacgagtggttccgcgccttcaaccacaccccg
ctcgaccaggtacgggtggtgatcctcgggcaggacccgtaccccacgccggggcatgcc
aacggcctgtgcttttccgtgcgcccggacgtccggccgttgccgaagtcgctgctgaac
atcttcaaggagctcgccgacgatctgggtatccagaacacgaacggtgacctcacccac
tgggccgaccagggcgtgctgttgctgaacgccgtgctgaccgtcgcctcgggccagccg
gcctcgcaccagggcatgggctgggaggcgctgaccgaccgggccgtccgcgtgctcgcc
gagcagccccgcccgatcgtgttcgtcttctggggtgcgcaggcgcagaaaaaggccgcg
cacgtccatcgccccgagcatctcgtcatcaagagcccccacccctcgccgctgtccgcc
taccgcggcttcttcggctccaagcccttctcccgcattaacgcctttctcgaatcgcac
gggctcgagccgatcgactggcggacggggtaa
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