Gardnerella vaginalis 409-05: HMPREF0424_0001
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Entry
HMPREF0424_0001 CDS
T01146
Name
(GenBank) LysR substrate binding domain protein
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gva03000
]
HMPREF0424_0001
Transcription factors [BR:
gva03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HMPREF0424_0001
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR
Motif
Other DBs
NCBI-ProteinID:
ADB13983
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All DBs
Position
complement(12..914)
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AA seq
300 aa
AA seq
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MNIRALEYLIAFAQEGSFTKAAVRMRVSQPTLSTQIKKLEETLDVELIERTPGKQILTPA
GREVVYYAKRIQADMSRIRQAARRSEDPWSSTVVLGVFPTLGPYLLPRIMPALRRLKPKL
TIRFIEEKSAKLIDLLDSGQVDAVILSESLNAPSIKVCHVFDEDFLLATSTNSLLGHESK
PIELSDLSTQKVLLLEDGHCMRRSMLDVCQKVGAKQSEFRATSLETLRYMVVGSKDVTLL
PRLATVPPIVQPVGLMLREFKNPKPYRSLYLNWRAASPVDKIMEGLCTIISSACSDLHKK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaatattagagcgttagaatatctaatagcttttgcacaagaaggaagctttaccaag
gcggctgttcgtatgcgcgtctctcagcctactctttcaacgcaaattaaaaaacttgaa
gagactttagacgtagaacttattgagcgcactcccgggaaacaaatcttaactcctgct
gggagggaagtggtttattacgctaaacgtattcaggcagatatgtcacgtattcgacaa
gctgcaagacgctcagaagatccatggtcatctacagtagttttgggtgtgttcccaacg
ttaggaccatacttacttccaagaattatgcctgcactcaggcgtttaaaaccaaaactt
actattcgttttatagaagaaaaatcagcgaaacttattgatttgctagatagtggtcaa
gtcgacgcagttatattaagcgaaagtttgaatgcgccttcaataaaagtgtgtcatgtt
tttgacgaagattttcttcttgcgacttctacaaattctttgctaggacacgagagtaaa
ccaattgaactttcagatttgtctactcagaaagtgcttttactagaagatgggcattgt
atgcgtagaagcatgctcgatgtatgccaaaaagtgggggcgaaacaatcagaatttagg
gcaacgtcgttagaaactttgcgatatatggttgtaggtagcaaagatgtgacattattg
ccgcgtcttgcaactgtacctccaattgtgcaaccagttggtttgatgttgcgtgagttt
aagaatcctaaaccttatcgatcgttatatttgaattggcgcgcagcttctccagtagac
aaaattatggaaggattgtgcacaataattagttcagcatgctctgatttgcataaaaaa
taa
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