Gardnerella vaginalis 409-05: HMPREF0424_0018
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Entry
HMPREF0424_0018 CDS
T01146
Symbol
ppc
Name
(GenBank) phosphoenolpyruvate carboxykinase (GTP)
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00620
Pyruvate metabolism
gva00680
Methane metabolism
gva00710
Carbon fixation by Calvin cycle
gva00720
Other carbon fixation pathways
gva01100
Metabolic pathways
gva01120
Microbial metabolism in diverse environments
gva01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
HMPREF0424_0018 (ppc)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
HMPREF0424_0018 (ppc)
00720 Other carbon fixation pathways
HMPREF0424_0018 (ppc)
00680 Methane metabolism
HMPREF0424_0018 (ppc)
Enzymes [BR:
gva01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
HMPREF0424_0018 (ppc)
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Gene cluster
GFIT
Motif
Pfam:
PEPcase
PEPcase_2
Motif
Other DBs
NCBI-ProteinID:
ADB14120
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All DBs
Position
complement(19084..21840)
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AA seq
918 aa
AA seq
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MATENQQVTPADATIVTSGLGRKGPEERDLPASLKQDMDLCLHILRDVLGEFDEKLLAVF
DDVRLNAVEASAAHFAQMVDAKVTADDGLSKAVSKLNGMNLHDTQLLARAFATYFHLANL
CEENYRVSVLHQRECEVEDSLPVDPVNELTCAYHKLLTEMSPAEAKELLAKLEFHPVFTA
HPTEARRKAVAGKIRRISQLLSEHHRLGGSDKRENYRRLYNEIDALLRTSPIALKKPTPV
EESDTILDIFDATLFDTIPVVYRRFDDWLLGKKAGLVPPRCPAFFHPGSWIGSDRDGNPN
VTAKVSRQVARKFSDHVLAALENRTREVGKCLTMETRTTPPSVELLELWNRQREMSEQLT
ENASDVSNSEPHRAVMLVMADRLHRTISRDTDLMYHSCEDFIEDLQIVQRSLAEGGDPRA
AYGPLQDLIWQAQTFGFHMVEMEFRQHSLVHSRALEDIREHGLHGERGPLQPMTREVLDT
FRALGAIQKRNGMRAARRYIISFAKSAQHVRDVFELNRLAFAHPQDAPTIDVIPLFEQLE
DLQNSVNVLEEIIKIPEVQARLKATGRKMEVMLGYSDSSKDAGPTSATLALHSAQERIAK
WAKKHDIDLTLFHGRGGAVGRGGGPANRAVLAQPVGSVNCRFKLTEQGEVIFARYGNPIL
AIRHVESVASATLLQSSPSVEKTNTDMTKKYADMAAKLDVAAHERFLDLLQTDDFTPWFS
TVTPLSEIGLLPIGSRPAKRGLGAKSLDDLRTIPWVFSWAQARINLAAWYGLGTACEKFG
DLETLRRAYEEWPLFSTFIDNIEMSLAKTDERIARMYLSLGDREDLSDKVLSEMQLTRKW
VLQIVDDKWPLQHRHVLGQAIRVRSPYVDALSVIQSLALHKLRNKVDKEELSESQQAEFI
YLILCTVSGVAAGLQNTG
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagaaaatcagcaggttactccggcagacgcaactattgttacgtctggctta
gggcgaaaaggcccagaggagcgtgaccttccagcatcacttaagcaagacatggatttg
tgcttgcatattcttcgcgatgttcttggcgaattcgatgaaaaattattagcagtattc
gacgatgtgcgtttgaatgctgtagaagctagtgcggctcattttgcgcaaatggtagac
gcaaaagtaactgcagatgatggcttaagtaaagctgttagcaagctcaacggaatgaat
ttgcacgatacgcagcttttagctcgtgctttcgcaacatatttccacttggcaaatttg
tgcgaggaaaattatcgtgtttctgtacttcatcagcgtgaatgtgaagttgaagattca
ttgcctgttgatccagttaacgaactaacttgtgcttatcacaagttgctcactgaaatg
agccctgctgaagcgaaagaattgcttgcaaagcttgagtttcatcctgtatttaccgcg
cacccaaccgaagctcgtcgtaaagccgttgcaggtaagattcgcagaatttcgcaatta
ctaagcgaacatcatcgtttaggcggatctgataagcgcgaaaattatcgacgtctctat
aacgaaattgatgcgcttcttcgcacttctccgattgctttgaagaagccaactccagtt
gaagaatctgacaccattctcgacatttttgacgccactttgtttgacacgattccagtc
gtgtatcgtcgatttgacgattggctgcttggtaagaaggctggattagttcctccgcgt
tgccctgcattcttccatccaggaagctggattggttcagatcgagatggcaatcctaat
gtgacagctaaagtgagccgtcaagtcgctcgaaagtttagcgatcacgtgcttgcagct
ttggagaatcgcacgcgcgaagttggcaagtgcttaactatggaaactcgcacaactcct
ccaagcgtggagttgcttgagttatggaatcgtcagcgcgaaatgagcgaacagcttaca
gaaaacgcttcagacgtttctaatagtgagccacatcgtgcagtaatgttggtaatggct
gaccgtttgcatcgcactattagccgcgatacggatttgatgtatcattcttgcgaagat
ttcattgaggatttgcaaattgtgcaacgctctttggcagaaggcggagatcctcgtgct
gcatatggtcctttgcaggatttgatttggcaagcgcaaacctttggattccacatggtt
gaaatggaattccgtcagcattctctcgtgcattctcgcgctttggaagatattcgcgaa
catggattgcatggcgaacgcggtccgcttcagccaatgactcgtgaagtactcgatacg
ttccgcgctttaggagcaattcaaaagcgcaacggtatgcgcgctgctcgacgttatatt
atttccttcgcaaaatctgctcagcatgtacgtgacgtatttgagctaaatcgtcttgct
ttcgctcacccacaggatgcgccaacaatcgacgtcattccgctgtttgagcagttggaa
gatttgcaaaactctgtaaatgtgcttgaggagattattaaaattcctgaagtgcaagct
cgtcttaaggctactggccgcaagatggaagttatgcttggctactcggattcttccaag
gatgctggtcctacttccgcaacgcttgctttgcattctgctcaggagcgcattgctaag
tgggctaagaagcacgatattgatttgacactgttccacggccgcggcggtgctgttggt
cgcggtggcggtcctgcaaaccgtgcagtgcttgctcagccagttggttccgtcaactgc
cgcttcaagcttactgagcagggcgaggttattttcgcacgatatggcaatccaattctt
gctattcgtcacgttgaatccgttgcttctgcaactttgcttcagtcttcgccaagtgtt
gagaaaactaacactgatatgacgaagaagtatgcggatatggctgcaaaacttgatgtt
gcagctcatgagcgtttccttgatttgctgcaaacggatgactttactccatggttctct
acggttacgccgcttagtgagattggtttgcttccaatcggttctcgcccagctaagcgc
ggtttgggtgcgaagtcgttggatgatttgcgcacaatcccgtgggtgttctcctgggct
caggctcgcattaacttagcagcatggtacggattgggtactgcttgcgaaaagtttggc
gatttggaaactttgcgtcgcgcttacgaagagtggccgctgtttagtacttttattgac
aatattgagatgtctttggctaaaacggatgagcgtattgctcgcatgtacttaagcctt
ggagatcgcgaagatttgagtgataaagtactttcagaaatgcagcttactcgcaagtgg
gttttgcaaattgttgacgacaagtggcctttgcaacatcgtcacgtgctcggtcaggca
atccgcgtgcgctcgccttatgttgacgcgctgtctgtaatccagtcgcttgcattgcac
aagcttcgcaacaaggtagacaaagaagagcttagcgaaagccaacaggcagagttcatc
taccttattctttgcactgtttctggtgttgctgcaggcttgcagaatactggatga
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