Gardnerella vaginalis 409-05: HMPREF0424_0040
Help
Entry
HMPREF0424_0040 CDS
T01146
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gva03032
]
HMPREF0424_0040 (gyrA)
03400 DNA repair and recombination proteins [BR:
gva03400
]
HMPREF0424_0040 (gyrA)
Enzymes [BR:
gva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF0424_0040 (gyrA)
DNA replication proteins [BR:
gva03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0424_0040 (gyrA)
DNA repair and recombination proteins [BR:
gva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0424_0040 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADB14274
LinkDB
All DBs
Position
complement(45488..48118)
Genome browser
AA seq
876 aa
AA seq
DB search
MVDEINSARDDAERDQLPDGSMEPQSPQEADNTDYGLMKGARVKNMDLQQEMRESYLAYA
LSVIVERALPDVRDGLKPVHRRVIYAMYDGGYRPDRGYNKCSRVVGDVMGKYHPHGDSAI
YDTLVRMAQSWSMRYMLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMEMVRDIDKDTVDF
LPNYDGKTQEPTVLPARFPNLLVNGSAGIAVGMATNIPPHNMREVADGVHWALDHPDASK
EELLEALIQRIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIKGRMCLVVTE
LPYQVNPDRLAASIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYK
HSQLQQTFGANMLALVDGVPRTLSLDAFIRHWVTHQLEVIDRRTRYLKREAEERDHILQG
YLKALDMIDEVVALIRSSKDVETARTGLMNLLDVDEVQADAILAMQLRRLAALERQKILD
EHEDLMIKIADYNDILASPERQRKIVGDELDEIVAKYGDDRRTKILPFSGEMNVEDLIAE
ENVVVTVTRAGYIKRTKADEYRAQHRGGKGIKGAKLREDDVVDHFFLTSTHNWLLFFTNR
GRVYRLKAYELPEGSRDSKGQHVANLLQFTPGETIQAVLSIPNYDVAKYLVLATRSGKVK
KTALQEYDSPRQGGLIAVRLMANEETGEPVDELIGAALCNSEDDIILVSKLGMSLKFRAD
DEQLRPMGRQTAGVQGMRFREGDELLDMDVVAAETSKDLLVVTNEGFAKRTAIEEYRLQG
RNGYGVKAVQLAEGRGSLVGALIVEETDQVMAIMKSGKVIRSDINEVKRTGRTTQGVTLA
KPDKGDEIISIARNEETDDEENQLEEKEATSENEEA
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
gtggtagacgaaataaattccgctcgtgatgatgctgagcgagatcagcttccagatggt
tctatggaaccacagagccctcaggaagcagataatactgattatggcttaatgaagggt
gctcgcgtaaagaacatggatttgcagcaggaaatgcgcgaatcttatttagcttacgca
ttatctgttattgttgagcgtgctttaccagatgttcgtgatggtttaaaacctgttcac
cgtcgtgttatttatgcaatgtatgatggaggatacaggcctgatcgcggatataacaag
tgttctcgcgttgtcggtgatgttatgggtaagtatcaccctcatggtgattctgctatc
tatgacactttagtgcgtatggctcagtcttggtcaatgcgctatatgcttgttgatggt
caaggaaactttggttctcctggtgatgatcctgcagcagcaatgcgttatacggaatgc
cgtatggcaccgttggctatggaaatggtacgagatatcgataaagataccgttgatttc
ctgccaaattatgatggtaaaactcaagagcctacggttttgccagctcgtttcccgaat
cttttagttaatggttctgctggtattgctgttggtatggcaaccaatattccacctcat
aatatgcgtgaagtggctgatggtgtgcactgggcgttggatcatcctgatgcaagcaaa
gaagaacttcttgaagctttaattcagcgaattaaaggacctgatttccctactggagca
acaatcttaggtcacaagggaattgagcaagcgtaccgcacaggtcgcggcttaattaca
atgcgagcagtagttaatactgaggaaattaagggacgcatgtgcttggttgttaccgag
cttccataccaagttaatcctgatcgcttagctgcttctattcgtgaagctgtacgagat
ggcaaaattcaaggtattgcagatatgcgcgacgaaacgtctggtcgtactggtcagcgt
ttggttcttgttcttaagcgtgatgctgttccaaaagttgttttaaataatttgtataag
cattcgcaattgcagcaaactttcggcgcaaatatgcttgctttggttgatggcgttcct
agaactttgagtttggatgcgtttattcgtcattgggtaactcatcagcttgaagtaatt
gataggcgtacacgttacttaaagcgtgaagctgaagagcgagatcatattttgcaaggc
tatttgaaagctttggatatgattgatgaagttgtggctttaattcgttcatctaaagat
gttgaaactgctcgtactggtttaatgaatttgcttgatgttgatgaagttcaagcggat
gccattcttgcaatgcaacttcgtagacttgcagctttggaacgtcagaagattctcgac
gagcatgaagatttgatgattaaaattgctgattacaacgatattttggcaagcccagaa
cgtcagcgcaaaattgttggcgatgaacttgatgaaattgttgcaaaatatggtgatgat
cgcagaactaagattcttccattctctggtgaaatgaatgttgaagatcttattgctgaa
gaaaacgttgttgtaacagtaactcgcgcaggttatattaagcgtactaaggcagacgag
tatcgtgctcaacaccgcggtggtaaaggcattaagggtgcaaagcttcgtgaagatgat
gtagttgatcacttcttcttaacttctacacacaattggttgctcttctttactaatcgt
ggtcgagtttatcgtctgaaagcctacgaacttccagaaggatctcgcgattctaaaggt
cagcatgttgctaatttgttgcaatttactcctggagaaacaattcaagcagtgttatca
attccaaattatgatgttgctaaatacttggtattggcaactcgttccgggaaagttaag
aaaactgcattgcaagagtatgattctccacgtcaaggcggtttgattgctgtacgtttg
atggcaaatgaagaaacaggtgaacctgtcgacgagcttattggtgcagctttgtgcaat
tcagaagatgacattattcttgtttctaagcttggaatgagtttgaagtttagagcagat
gatgaacaacttcgaccaatgggtcgtcagactgccggcgttcagggtatgagattccgt
gaaggtgacgaattactcgatatggacgttgttgcggcagaaactagtaaagatcttctt
gttgttactaatgaaggttttgctaagcgaactgctattgaagagtatcgtttgcaagga
agaaacggctacggtgttaaagctgttcaacttgcagagggtcgtggttcattagttgga
gctttgattgttgaagaaacagatcaagtaatggcaattatgaagtccggtaaggtaatt
cgttctgacattaatgaagtgaagcgcactggtagaacaactcaaggcgtaaccttagct
aagccggataaaggcgatgaaattatttctattgcccgtaatgaagaaacggatgacgaa
gaaaatcaattagaagaaaaagaagctacttcagaaaatgaggaagcttaa
DBGET
integrated database retrieval system
