Gardnerella vaginalis 409-05: HMPREF0424_0103
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Entry
HMPREF0424_0103 CDS
T01146
Name
(GenBank) Thiol-activated cytolysin
KO
K11031
thiol-activated cytolysin
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0424_0103
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
gva02042
]
HMPREF0424_0103
Bacterial toxins [BR:
gva02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
HMPREF0424_0103
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GFIT
Motif
Pfam:
Thiol_cytolysin
Thiol_cytolys_C
Motif
Other DBs
NCBI-ProteinID:
ADB14641
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Position
complement(121784..123334)
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AA seq
516 aa
AA seq
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MKSTKFYRNAAMLLLAGATIIPQCLAVPAMADSSAKPSAPAASCAASKDSLNNYLWDLHY
DKTNILARHGETINNKFSSDSFNNNGEFVVVEHQKKNITNTTSNLSVTSANNDRVYPGAL
FRADQNLMDNMPSLISANRAPLTLSIDLPGFHGGESAVTVQHPTKSSVTSAVNGLVSKWN
AQYAASHHVAARMQYDSASAQSMNQLKAKFGADFAKIGVPLKIDFDAVHKGEKQTQIVNF
KQTYYTVSVDAPDSPADFFAPCTTPESLKNRGVDSKRPPVYVSNVAYGRSMYVKFDTTSK
STDFQAAVEAAIKGVDIKPNTEFHRILQNTSVTAVILGGSANGAAKVITGNIDTLKALIQ
EGANLSTSSPAVPIAYTTSFVKDNEVATLQSNSDYVETKVSAYRDGYLTLDHRGAYVARY
YVYWDEYGTDIDGTPYVRSRAWEGNGKYRTAHFSTTIQFKGNVRNLRIKLEEKTGLVWEP
WRTVYNRTDLPLVRQRTIKNWGTTLWPRVAETVKND
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcacaaagttctaccgtaatgcagcaatgttgttgctcgcgggcgcgactatt
attccacaatgcttagcagttccagcaatggcagattcttctgcaaagccttctgcacca
gctgcatcttgtgcagctagcaaggactcgctgaacaactacttgtgggatttgcattac
gataaaacgaatattctcgcacgtcacggcgaaacaattaacaataaattctctagcgat
agcttcaacaataacggtgaattcgttgttgttgagcaccagaagaagaacatcacaaat
acaacatcaaacttgtcggtaacttcggccaacaatgatcgcgtatatccgggtgcatta
ttccgcgctgaccagaatttgatggataacatgccaagcttgatttcagcaaatcgtgct
ccattaactttgagtattgatttgccaggcttccatggcggcgagagtgctgtaaccgtg
caacatccaaccaagagctccgttacttcagcagttaacggcttagtttctaagtggaat
gcacaatatgcagcaagccatcatgtggcagctcgtatgcagtatgattccgcaagcgca
cagagcatgaaccagctcaaagctaagtttggtgctgattttgcaaagattggcgtaccg
ctgaagattgatttcgatgcagtacacaagggtgagaagcagactcaaattgtgaacttc
aagcaaacttactacacagtaagcgttgacgctccagatagcccagcagatttctttgct
ccatgcactacgccagaaagcttgaagaaccgtggcgttgacagcaaacgcccaccagtt
tacgtatcaaacgtagcttatggtcgctcaatgtacgtaaagttcgataccaccagcaag
agcactgatttccaggctgcagtagaagcagcaattaagggcgtagacatcaagccaaac
accgaattccatcgcattctccagaatacctctgttactgcagtgattctcggcggcagc
gctaacggtgcagcaaaggttattaccggcaatatcgatacgctaaaggctttgattcag
gaaggtgcaaatttgagcacctctagcccagctgttccaatcgcttacactacttccttc
gtaaaagataacgaagtagcaactctccagagcaacagcgattatgttgagactaaggtt
tctgcttaccgtgacggttatttgaccttggatcatcgtggggcttatgtagctcgctac
tacgtctactgggatgagtacggcactgatatcgacggaactccatacgtacgttctcgc
gcttgggaaggaaacggcaagtatcgtaccgctcacttcagcacaacgattcagttcaag
ggcaatgtgcgcaatcttcgcattaagttggaagaaaagaccggcttagtatgggaacca
tggcgcacagtgtacaaccgtactgatttgccgttggttcgccagcgcacaatcaagaac
tggggtacaactttatggcctcgcgtcgctgaaactgtaaagaatgactga
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