Gardnerella vaginalis 409-05: HMPREF0424_0192
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Entry
HMPREF0424_0192 CDS
T01146
Symbol
valS
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0424_0192 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gva01007
]
HMPREF0424_0192 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gva03016
]
HMPREF0424_0192 (valS)
Enzymes [BR:
gva01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
HMPREF0424_0192 (valS)
Amino acid related enzymes [BR:
gva01007
]
Aminoacyl-tRNA synthetase
Class I (U)
HMPREF0424_0192 (valS)
Transfer RNA biogenesis [BR:
gva03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF0424_0192 (valS)
Prokaryotic type
HMPREF0424_0192 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1_2
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ADB14537
LinkDB
All DBs
Position
213981..216758
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AA seq
925 aa
AA seq
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MSEQDNNAVKHAYLTPLPNKVGVDGLEDKWRSNWDEAKTYAFHNSRDRKAVYSIDTPPPT
VSGHLHVGHVFSYTHTDVIARYKRMQGFDVFYPMGWDDNGLPTERRVQNYYGVRVDTSLK
YDPDFKPPFEGTEGKKIEAKDQVPVSRQNFIELCERLTSQDEKLFEALWRRLGLSVDWSQ
TYHTIGEQPRRVAQKAFLRNLARGEAYQKDAPGLWDVTFQTAVAQAELESREYPGFYHKI
AFRFEDGTPIYIETTRPELLAACTSLIANPEDERYKKYFGQEVYSPLFKVKVPILAHSAA
QMDKGAGIAMCCTFGDVTDVEWWRDLNLPTRPIIQRNGRIVMTTPDWITDESGREMFEKI
AGKTTFSARKEIVEALQAAGDMEGEPKPTKRMTNFYEKGDKPLEIVTSRQWYLKNGGTDE
KLNAELIERGKELNFHPDFMRVRYENWVHGLNGDWLISRQRFFGVPFPLWYPVNENGEVD
YEHPLTPSEDRLPIDPTIDVPEGFDESQRDQPNGFTAEQDIMDTWATSSLTPQIVTRWEE
PGEENQALFKATFPMDLRPQGQDIIRTWLFSTVDRAHLENGCLPWKHAALSGWILDPDHK
KMSKSKGNVVVPNKPIEEFGADAVRYWATSAKLGLDATYDEGQMKIGRRLAIKLLNATKF
ALAIGREDDEHQVLESASADWDFADVTEVLDRSVMAKLASVIRTATDALESYEHSKALEA
IETFFWEFCDDYIELAKNRAYGTAESTGRTPSEAAVKSARTTLGLALDALARLLAPYLPY
ATEEVWSWMHDGEGSVHRASWPCAKAYESAANGVSADTLAYAGEALATLRKIKSEAKVSM
KTPILQVTLNVAENAYKAVEETLDDVAEAGRVTGEVKLNAVKAAVAGDSSASESESASDS
AESDAANVNVSVAQSELGEAPAKKK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacaggataataacgcagtaaaacacgcatatttaacaccattgcctaacaag
gttggtgttgatggtcttgaagacaagtggcgtagtaattgggacgaagctaagacttac
gcattccataattctcgcgaccgtaaggccgtatattctatcgatactccacctccaacc
gttagtggtcacttgcacgtaggtcacgtattctcttacacgcatacggatgtcattgcg
cgatataagcgcatgcaaggctttgacgtgttctacccaatgggttgggacgataacggc
ttgccaacagagcgccgagtacaaaattattacggcgttagagtggatacttcgttgaag
tatgaccctgattttaagccgccttttgaaggtactgaaggtaagaagattgaggcaaaa
gatcaggttcctgtaagccgacagaactttattgaactttgcgaacgcttaacttctcag
gacgagaagctttttgaagctttgtggcgtaggcttggtctttctgtggactggtcgcaa
acttaccacactattggtgagcagcctcgccgagttgcacaaaaagcattcttgcgcaat
cttgctcgcggagaagcgtatcagaaagatgctccaggtttgtgggatgttacattccag
actgctgttgctcaggctgagcttgaatcgcgcgaatatcctggtttctaccataagatt
gcgttccgttttgaagatggtacgccaatttatattgaaactacgcgcccagaattgctt
gctgcatgcacctctttgattgcaaatccagaagatgagcgttataagaagtactttggt
caggaagtttattctccactgtttaaggtgaaagttccaattttggcgcattctgctgct
caaatggacaagggtgcaggcattgcaatgtgctgcactttcggtgatgtaaccgacgtt
gagtggtggcgtgacttgaatcttccaactcgaccaatcattcagcgcaacggccgcatt
gtaatgaccactcctgattggattacggacgagtccggccgcgaaatgttcgagaaaatt
gctggtaaaaccactttctctgctcgtaaggaaattgttgaagctttgcaagcagctgga
gatatggaaggcgaaccaaagccaacaaagcgtatgacgaacttctacgaaaagggtgat
aagcctttggaaatcgtcacttctcgtcagtggtacttaaagaacggtggcacggacgaa
aagttgaatgctgagcttattgagcgcggcaaggagcttaatttccacccagactttatg
cgcgtgcgctacgagaattgggttcatggattgaatggtgactggcttatttctcgccag
cgcttcttcggcgtgccattcccactttggtatccagtaaacgaaaatggggaagtggat
tacgagcatcctttgactcctagcgaagaccgtttgccaatcgacccaactatcgatgtt
ccagaaggattcgacgaatctcagcgcgaccagccaaacggctttactgctgagcaagac
attatggacacttgggcaacatcttccttaactccgcaaattgtgacccgttgggaagag
ccaggtgaggaaaatcaagctttgtttaaggctactttcccaatggatttgcgtccacaa
ggtcaagatattattcgtacttggctgtttagtacggttgatcgtgcgcatcttgaaaat
ggctgcttgccttggaagcatgctgcgctttctggttggattcttgatcctgaccataag
aagatgtctaaatctaagggcaatgtggttgtgccaaataaaccaatcgaagagtttggc
gcggatgctgtgcgctactgggcaacttctgcaaaacttggcttggatgcaacttacgac
gaaggtcaaatgaagattggtcgacgtttagcgattaagcttttgaatgctacgaagttt
gcgctcgcaattggtcgcgaagatgatgagcatcaggttcttgagtctgccagcgcggat
tgggattttgcagatgttacggaagttttggatcgctctgttatggcaaagcttgcatcc
gttattcgtactgcgactgatgcgcttgaatcttacgagcattctaaggctttggaagca
atcgaaacattcttctgggagttctgtgacgattacattgagcttgcaaagaatcgtgct
tacggtactgcagaatccactggacgcactccaagtgaagctgctgtgaagtctgctcgc
acaactcttggtcttgcactcgatgctttggctcgcttgcttgctccttacttgccttac
gctacggaagaagtgtggagctggatgcatgacggcgaaggatccgtgcatcgtgctagc
tggccatgcgctaaggcgtatgagtctgctgcaaacggagtttctgcagacactttggct
tacgcgggtgaagctttggctactttgcgcaagattaagtctgaagcaaaagtttctatg
aagactcctattttgcaagtaactttgaacgttgcagaaaacgcttacaaggctgttgag
gagactttggatgacgttgctgaagctggtcgcgttactggagaagtaaaacttaacgct
gttaaggctgcagttgctggagattcttctgcttctgaatctgaatctgcttctgattct
gcagaatctgatgcagctaacgtaaacgtttcagttgctcaaagcgaactcggcgaagct
cctgcaaaaaagaagtag
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