Gardnerella vaginalis 409-05: HMPREF0424_0195
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Entry
HMPREF0424_0195 CDS
T01146
Symbol
argS
Name
(GenBank) arginine--tRNA ligase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0424_0195 (argS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gva01007
]
HMPREF0424_0195 (argS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gva03016
]
HMPREF0424_0195 (argS)
03029 Mitochondrial biogenesis [BR:
gva03029
]
HMPREF0424_0195 (argS)
Enzymes [BR:
gva01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
HMPREF0424_0195 (argS)
Amino acid related enzymes [BR:
gva01007
]
Aminoacyl-tRNA synthetase
Class I (G)
HMPREF0424_0195 (argS)
Transfer RNA biogenesis [BR:
gva03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HMPREF0424_0195 (argS)
Prokaryotic type
Other AARSs
HMPREF0424_0195 (argS)
Mitochondrial biogenesis [BR:
gva03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HMPREF0424_0195 (argS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1d
tRNA-synt_1
tRNA-synt_1g
tRNA-synt_1f
tRNA-synt_1e
NOT2_3_5_C
Motif
Other DBs
NCBI-ProteinID:
ADB13757
LinkDB
All DBs
Position
217453..219249
Genome browser
AA seq
598 aa
AA seq
DB search
MNPESLSELIEKIAKDLVASGKAGNLTEDLIPAAEKLAVMRPKDRAHGDWATNVAMQLAK
KAGMKPRDLAELFAERLQEAEGIARVEVAGPGFINITLDSASAAAVVDEVLKQGAAFGKN
THLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQIN
RFAKSLVAAAHGEETPADGYKGAYINEIADSVIKEANADGVDVLSLPRIDLGKDEEGLPL
GEGDSEQREEFRKRAVPMMFAEIRKSMRDFRVSFDVWFHENSLYEDGEVERAIADLRERG
DIFEKDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREQNPADVAIYMLG
ADHHGYIGRMMAMCAAFGDKPGENMQILIGQLVNVMKDGKPVRMSKRAGNVITIDDLVDA
IGVDASRYSLARTDYNTSVDIDLDLLASHSNDNPVYYVQYAHARSCNVARNAADAGITQD
GADLSLLNTETDGEVLAALAQWPAALAQAGDLRAPHRVAHYLEDLAASYHKWYNLERVVP
MELTDPENRLPEAEREAQRIAKCPEPARAAARLKLNAAVRTVIATGLDLLGVSAPEKM
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaaagcttaagtgaattaattgaaaaaattgctaaagatttagtagcaagc
ggtaaagctggcaatctaacagaagatttgattcctgctgccgaaaaacttgcagttatg
cgaccaaaagatcgtgcacacggcgattgggctacgaacgttgctatgcaactcgctaaa
aaagctggtatgaagcctcgcgatttagcagaactttttgctgagcgtttgcaagaagcg
gaaggtattgcgcgcgtagaagtggcaggtcctggttttattaacataacgcttgattct
gcttctgcggcggcggtcgtagacgaagtcttaaagcagggtgcggcttttggcaagaat
acgcatttgagcggcaaaactttgaatcttgagtttgtatccgcaaacccaactggtcca
atccacattggtggaactcgctgggctgcagttggcgattctatggctcgagttttggaa
gcgaacggcgcaaaagttgtgcgcgaatactacttcaacgatcacggtgagcaaatcaac
cgttttgcaaagtctttagttgctgcagctcatggcgaagaaacgcctgcagacggctac
aaaggcgcgtatattaacgaaattgcggactctgttataaaagaagcgaatgcggacggc
gttgatgttctttcattgccgcgaattgatcttggaaaagacgaggaaggattgcctctt
ggcgaaggcgattccgagcagcgcgaagagttccgcaagcgcgcagttccaatgatgttt
gcggaaattcgtaagtctatgcgcgattttcgtgttagtttcgacgtgtggttccacgaa
aatagcctgtacgaggatggcgaagttgagcgcgctattgcagacttgcgtgagcgtgga
gatattttcgaaaaagacggcgcaacttggtttgaatccactaagcatggcgacgacaag
gatcgcgtaattattaagtccgacggaaactacgcttactttgctgctgatattgcgtac
tatcgcaacaagcgtcaccgcgagcagaatcctgcagacgtagcaatctacatgctcggc
gcggatcatcacggatatattggccgaatgatggcaatgtgcgcggcttttggcgacaag
ccgggcgaaaacatgcagattcttattggtcagcttgtaaacgttatgaaggacggaaaa
cctgtgcgcatgagcaagcgtgctggaaacgttattacgattgacgatttagttgatgca
attggcgttgacgcttcgcgctactcgcttgctcgcaccgactacaacacaagcgttgat
attgatttggatttgcttgcttctcacagcaacgataatcctgtgtactacgtgcaatac
gctcacgctcgcagctgcaatgtggctcgcaatgcggctgacgctggaattacgcaagat
ggcgctgatttaagcttgcttaataccgagactgacggcgaagtgttggctgctttggct
caatggcctgctgctttggctcaagctggcgatttgcgcgctcctcacagagttgcgcat
taccttgaggatttggcagcaagttaccacaagtggtacaaccttgagcgtgttgtacca
atggagttaactgaccctgaaaatcgtttgccagaagccgagcgtgaagctcagcgcatt
gcaaagtgcccagagccagctcgtgctgcagctcgcttaaagcttaacgctgctgtgcgc
acagttattgcaactggtcttgatttgcttggagtttctgctccagaaaagatgtga
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