Gardnerella vaginalis 409-05: HMPREF0424_0260
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Entry
HMPREF0424_0260 CDS
T01146
Symbol
rpsC
Name
(GenBank) ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HMPREF0424_0260 (rpsC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
gva03011
]
HMPREF0424_0260 (rpsC)
Ribosome [BR:
gva03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HMPREF0424_0260 (rpsC)
Bacteria
HMPREF0424_0260 (rpsC)
Archaea
HMPREF0424_0260 (rpsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
VAR1
KH_KhpA-B
FakA-like_M
Motif
Other DBs
NCBI-ProteinID:
ADB14418
LinkDB
All DBs
Position
286970..287788
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AA seq
272 aa
AA seq
DB search
MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDKIRKEMSHDLERAGVSRIV
IERTRDRVRVDIHTARPGIIIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV
AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ
TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQGKREGRRGGDRRPRRGA
RPANQQKAAEAQAEKPAEAAAAEAPAATETKE
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaagatcaatcctttcggctatcgcctgggcatcaccgagaatcatcgctct
aagtggttctctgactccaacaaagctggcgagcgttatcgtgacttcgtccttgaggat
gacaagattcgcaaggaaatgagccatgacctcgagcgtgctggcgtatctcgtatcgtt
atcgagcgcactcgtgatcgcgttcgtgtagatattcacactgctcgtccgggtattatc
atcggtcgtcgtggcgctgaagctgagcgtgttcgcgcaaagctcgagaagctcacaggc
aagcaagtacagctcaacatcttcgaagtgaagaacgctgcacttgacgctcagttggtt
gctcagggaattgcggagcagttgacaaaccgtgttacattccgtcgtgctatgcgtaag
gcacagcaagatgcaatgcgtgcaggtgccaagggtatccgtatcaagctctccggtcgc
cttggtggtgccgaaatgagccgctctgagttctatcgcgagggtcgcgttccactgcag
acccttcgtgccttgattgattacggcttctttgaagctaagaccacatacggtcgtatc
ggcgtaaaggtctggatctacaagggtgatatgaccgagcgtgagttcgaagagcagcag
gctcagcagggtaagcgtgaaggtcgtcgtggtggcgatcgtcgtccacgtcgtggcgca
cgtcctgctaaccagcagaaggctgctgaagcacaggctgaaaagccagctgaagctgca
gctgctgaagctcctgccgcaacggaaacgaaggagtga
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