Gardnerella vaginalis 409-05: HMPREF0424_0285
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Entry
HMPREF0424_0285 CDS
T01146
Symbol
infB
Name
(GenBank) translation initiation factor IF-2
KO
K02519
translation initiation factor IF-2
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gva03012
]
HMPREF0424_0285 (infB)
03029 Mitochondrial biogenesis [BR:
gva03029
]
HMPREF0424_0285 (infB)
Translation factors [BR:
gva03012
]
Eukaryotic type
Initiation factors
MTIFs
HMPREF0424_0285 (infB)
Prokaryotic type
HMPREF0424_0285 (infB)
Mitochondrial biogenesis [BR:
gva03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
HMPREF0424_0285 (infB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
EF-G_D2
IF2_N
Ras
GTP_EFTU_D2
MMR_HSR1
Roc
SRPRB
MMR_HSR1_Xtn
ATP_bind_1
Arf
Motif
Other DBs
NCBI-ProteinID:
ADB13638
LinkDB
All DBs
Position
304232..307096
Genome browser
AA seq
954 aa
AA seq
DB search
MVKKRVYELAKEFGVDSKTVLERLKSMGEFVKSASSTVEAPVVRRLQTALASDGNKSEKA
SSASKPAAPKAKPQAKPQAKPQAKDSSHSDSVAGSSANQPVHNTASHFVPKPGANHTRSN
NPSRSNAAAGENRKNDRRNDNRDNRGESRQQAQGQSHSDRSQMPPRPRPHQNAQGAGASA
PRPGNNPFSRKQGMRAPTPGDIPRPHPMSRPGAENGRGGRPGQAGSGPQGSRGERAERGG
RSRGGRSGQGGARSSQWSGQRRGQGGAGAGSGASSRPSAESRFASQGASFQAAAAGAPNG
GPSRGGGRGRAGAAGAFGRQGGKSSKARKNRLAKRREYEELKAPVIGGVRIPSGNGATIR
LRQGATLSDLAEKIDVNPAALVTVLFHLGEMATSTQSLDESTFQILGEEIGWNISIVSAE
EEDKELLQQFDIDLDEEELQEDDDLQSRPPVVTVMGHVDHGKTRLLDTIRKSNVIDREAG
GITQRIGAYQVTVNLEGKPRKITFLDTPGHEAFTAMRARGAELTDVAILVVAADDGVMPQ
TVEAINHAQAAHVPIVVAVNKIDVEGANPEKVRGQLTEYGLVAEEYGGDTMFVDISAKQG
TNVNKLLEAVLLTADAELDPKANPNMDARGATIEARLDKGRGAVATVLVQQGTLHIGDSI
VAGTSYGRVRAMLDENGKHLQDAAPSTPVQVLGLTSVPTAGDLFLVTSDDRSARQIAEKR
AATERAAQLAKRRKVVSLESLKEQFAKSEVDMLNIVIKGDSSGSVEALEDSLMKIEVSEE
VGIQVIHRGVGAITQNDVNLATVDKAVIIGFNVRPNRQVADLADREGVEVKYYSVIYKAI
EDIEAALKGMLKPEFEEVVTSHSEIREIFRSSKFGNIAGVMVQDGEVKRGTKCRILRDGV
ATVNDLEISSLRRFKDDVQSVSEGYEAGINLGSFNDIELGDIIETFEMKQIERK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
gtggttaaaaagcgcgtgtatgaactggccaaagaatttggtgtagacagtaaaaccgtg
ttggagcgtttgaagagcatgggcgaatttgttaagtctgcttcttcaacagttgaggct
ccagtagttcgtcgtttgcaaacagcgttagcatctgacggaaataagtccgaaaaggca
tctagtgcaagtaagcctgctgcgccaaaagctaagcctcaagctaagccgcaggctaaa
cctcaagctaaagattcgtcacacagtgattctgtagctggctcttctgctaaccagcct
gtgcacaacacagcttctcattttgttccaaagccgggtgcaaatcatactcgttcaaac
aatccttcgcgttctaatgctgctgccggcgaaaatagaaaaaatgatcgtcgcaatgat
aatcgtgataatcgcggcgaatcgcgacagcaagctcaaggtcaatctcactcagatcgt
tcacagatgcctcctcgccctcgtccgcaccagaatgcacaaggtgcaggcgcatctgct
ccacgtcctggtaataatccgtttagccgtaagcaaggtatgcgtgctcctacacctgga
gatattccacgtcctcatccgatgtctcgtcctggtgctgaaaatggccgcggtggtcgt
ccaggtcaagctggctctggacctcaaggttcgcgtggtgaacgtgcagaacgcggtggc
cgctcgcgtggtggccgctctggtcaaggtggcgcacgctcatcgcagtggtcgggtcag
cgtcgtggtcaaggtggcgcaggtgctggctctggtgcatcttctcgcccatctgcagaa
tctcgttttgcatctcaaggagctagcttccaggctgctgcagcaggcgcacctaatggt
ggtccatcgcgtggcggcggtcgcggtcgtgcaggagctgcaggcgcattcggtcgtcaa
ggtggtaaatcttctaaggctcgtaagaatcgtttagcgaaacgtcgtgaatacgaagag
cttaaagcaccagtgattggcggcgtgcgtattccttctggtaacggcgctacgattcgc
ttgcgtcaaggcgcaactctttctgatttggcggaaaagattgatgtaaatccagcagct
ttggtaactgtgctcttccacttgggagaaatggcaacatctacacaatctttggatgaa
tcaacattccaaattttgggtgaagaaatcggctggaatatcagcattgtttctgctgaa
gaagaagataaagagcttttgcagcagtttgacatcgatttggacgaagaagagctgcaa
gaagatgacgatttgcaatctcgtccgcctgttgttactgttatgggtcacgtcgatcac
ggtaaaactcgcttgcttgataccatccgtaagtcgaatgttatcgatcgcgaagcaggt
ggcattactcagcgtatcggtgcttatcaagtaactgtaaatcttgaaggaaaacctcgt
aagattacgttcctcgatactccaggtcacgaagcgtttactgctatgcgtgctcgcggt
gctgagcttacagacgttgcaattcttgttgttgcagcagacgacggcgtaatgcctcag
actgttgaagctattaaccacgctcaagctgctcatgtgccaattgttgtggctgtgaac
aagattgatgttgaaggtgctaatcctgaaaaggttcgcggtcagcttacagaatacggt
ttagttgctgaagaatacggcggcgacaccatgtttgtggatatttctgcaaagcagggc
actaacgtcaataagcttcttgaagctgtgttgttgactgctgacgctgagcttgatcct
aaggcaaatccaaatatggatgctcgcggtgcaactatcgaagctcgactcgataagggt
cgtggtgctgttgctactgttcttgtgcagcaaggtactcttcacattggtgattctatt
gttgctggcacttcttatggccgtgtgcgcgctatgcttgacgagaacggcaagcatttg
caggatgcggctccttccactcctgttcaggtgcttggtttaacttctgttccaaccgct
ggcgacttgttcttggttacttcggacgaccgttctgctcgtcaaattgctgaaaagcgt
gcagctacagagcgtgcagctcagcttgctaagcgccgcaaggttgtgtctcttgaaagc
cttaaggaacagttcgctaagtctgaagttgacatgctgaacatcgttattaagggcgat
tcttctggttctgttgaagctttggaagattccttgatgaagattgaggtctctgaggaa
gttggcatccaggttattcaccgcggtgttggtgcaattactcagaatgatgtgaacttg
gcaactgtcgataaggctgtgattattggcttcaacgtgcgtccaaaccgtcaagttgct
gatttggcagaccgtgaaggcgtggaagttaagtactactcagttatttacaaggcaatc
gaagatatcgaagctgctttgaagggtatgcttaagccagaattcgaagaagttgttact
tcgcattccgaaattcgcgaaatcttccgttcttccaagttcggcaatattgctggtgtt
atggttcaagatggcgaagtcaagcgcggtacgaagtgccgtattttgcgcgacggcgtt
gctacagtcaacgacctggagatttccagcttgcgtaggtttaaggatgacgtgcaatcc
gttagcgaaggttacgaagctggtattaatctcggcagcttcaatgacattgagcttggc
gatataatcgaaacctttgaaatgaagcagattgagcgcaagtaa
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