KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0336
Entry
HMPREF0424_0336   CDS       T01146                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
gva  Gardnerella vaginalis 409-05
Pathway
gva03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gva00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HMPREF0424_0336 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gva03019]
    HMPREF0424_0336 (rnc)
   03009 Ribosome biogenesis [BR:gva03009]
    HMPREF0424_0336 (rnc)
   03036 Chromosome and associated proteins [BR:gva03036]
    HMPREF0424_0336 (rnc)
Enzymes [BR:gva01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HMPREF0424_0336 (rnc)
Messenger RNA biogenesis [BR:gva03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HMPREF0424_0336 (rnc)
Ribosome biogenesis [BR:gva03009]
 Eukaryotic type
  90S particles
   RNase
    HMPREF0424_0336 (rnc)
 Prokaryotic type
  rRNA processing factors
   HMPREF0424_0336 (rnc)
Chromosome and associated proteins [BR:gva03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HMPREF0424_0336 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: ADB14500
LinkDB
Position
complement(363859..364587)
AA seq 242 aa
MRLDGNETRPGDPTQELLNALGTTISPDLLVEALTHRSFSHEHPGTRNYERLEFLGDAVL
ELVSTETLFSAHPDMTEGQLAKMRAKAVSEWALSAVAREKLHVGAYILLGRGEMEQGGNN
KDSILCDIVEALIGATFVEHGIDEARRVVHRLIDDTLAEVLTEGPALDWKTSLTVKAHDM
GLEDPEYRMAVSGPEYAPVFEARAVLAHKDGDEVLGVGSGSSKRKAQLAAAEIAWHALDA
RK
NT seq 729 nt   +upstreamnt  +downstreamnt
ttgagattagatggcaatgaaactcgccctggagacccaacacaggaacttttaaacgct
ttaggcacaactatttcgccggatcttttggtagaagcactcacccaccgctcgttctcg
cacgagcatcctggcacacgaaattatgagcgacttgagtttttgggcgatgctgtgctt
gagttagtttccacagaaacgctgttttctgcacatccagacatgactgaaggtcagctt
gcgaagatgcgagcgaaagctgtgtctgaatgggcgctttctgctgttgcgcgcgaaaag
ctgcatgttggcgcgtatattcttctcggtcgcggagaaatggagcagggcggaaataat
aaagattcaattttgtgcgatattgttgaagcacttattggtgcaacttttgttgaacat
ggaattgatgaagctcgcagagttgtgcatcgtttgattgacgacactttggcggaagtg
ctaactgaaggaccagctctcgattggaagacttcgcttactgtcaaagctcacgatatg
ggtttggaagatccagagtatcgaatggctgtttctgggccagaatacgctccagtattt
gaagctcgcgcggttttggcacataaggatggcgacgaagtgttgggagtcggaagtggc
tctagcaaacgaaaagcgcaactcgcagccgccgaaatcgcttggcacgcactcgacgcg
cgtaaataa

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