Gardnerella vaginalis 409-05: HMPREF0424_0369
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Entry
HMPREF0424_0369 CDS
T01146
Symbol
rpsD
Name
(GenBank) ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HMPREF0424_0369 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
gva03011
]
HMPREF0424_0369 (rpsD)
Ribosome [BR:
gva03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HMPREF0424_0369 (rpsD)
Bacteria
HMPREF0424_0369 (rpsD)
Archaea
HMPREF0424_0369 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ADB14475
LinkDB
All DBs
Position
399301..399927
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AA seq
208 aa
AA seq
DB search
MTNIQRSRRQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRL
RAQYGISEKQLRAAYEKGTHTAGQTGDAMLTDLETRLDALVLRAGFARTTAQARQFVVHR
HILVDGNLVDRPSYRVKPGQTIQVRAKSQTMVPFQMAAEGVHRDVLPAVPGYLDVNLASL
KATLTRKPEVDQIPVEVNIQYVVEYYAR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgactaatattcagcgttctcgccgtcaggtgcgtctttctcgcgccctcggcatcgct
ttaaccccaaaggctcagcgtatcttcgagaagcgtccatatgctccaggtgagcacggt
cgcactcgtcgtcgcaccgagtccgattacgcagtacgtcttcgcgagaagcagcgtctt
cgcgctcagtatggcatctccgagaagcagcttcgtgctgcttacgagaagggtacgcac
actgcaggccagaccggtgacgcaatgctcaccgatttggaaactcgtcttgatgctttg
gttttgcgtgcaggctttgctcgcaccactgcccaggctcgtcagtttgttgtacatcgt
catattttggttgatggcaatcttgtcgatcgcccatcttaccgtgtgaagccaggtcag
accattcaggttcgtgccaagagccagaccatggttccattccagatggctgcagaaggc
gttcatcgcgacgttttgccagcagttcctggttacctcgatgtgaatcttgcctctttg
aaggctactttgactcgtaagccggaagtcgatcagattccagttgaagtcaacattcag
tacgtcgtcgaatactacgctcgttaa
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integrated database retrieval system
