Gardnerella vaginalis 409-05: HMPREF0424_0465
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Entry
HMPREF0424_0465 CDS
T01146
Name
(GenBank) aspartate racemase
KO
K01779
aspartate racemase [EC:
5.1.1.13
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00250
Alanine, aspartate and glutamate metabolism
gva00470
D-Amino acid metabolism
gva01054
Nonribosomal peptide structures
gva01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HMPREF0424_0465
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF0424_0465
09109 Metabolism of terpenoids and polyketides
01054 Nonribosomal peptide structures
HMPREF0424_0465
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
gva01008
]
HMPREF0424_0465
Enzymes [BR:
gva01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.13 aspartate racemase
HMPREF0424_0465
Polyketide biosynthesis proteins [BR:
gva01008
]
Nonribosomal peptide tailoring proteins
Others
HMPREF0424_0465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp_Glu_race
MZB
Motif
Other DBs
NCBI-ProteinID:
ADB13839
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All DBs
Position
complement(509236..509964)
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AA seq
242 aa
AA seq
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MKRPFFAVLGGMGTLATESYIRLLNKETHAHNDQEFLDYVVFNDASVPDRTAYIVGESSE
SPFPTLADDIAKATAMGASFIVLTCNTAHYFYDKFQALTDVPIIHMPRGAVAEVSKRYPK
SKCNRIGFLGTAGSRKAGVYQRAIEEAGYTFVAPDDDLQKRITSLIYDDVKGTGNLNLRR
YESVLSDMLDPAGTCRCDALILGCTELSVLNEAFPLPQIPLVDAQAVLVKNTVEKAKSLR
MK
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtccgttttttgctgtacttggcggcatgggcacacttgcaacagaaagctat
attcgtttacttaataaagaaacgcatgcacataacgatcaagagtttttagattatgtg
gtattcaatgatgcttctgtgccagatagaacagcatatattgttggcgaatcatccgaa
agcccattccctactcttgcagacgacatagctaaagcaactgcgatgggtgcttcattt
attgtgctcacgtgcaatactgcgcattacttttacgataagttccaagcacttaccgac
gtgccaattatacatatgccgcgtggtgctgtagctgaagtttctaaacgttacccaaag
tctaaatgtaaccgtattggattcttaggtactgcagggtcgcgtaaagctggagtgtat
cagcgcgctatagaagaagcaggatacacattcgtagcacccgacgacgatttacaaaaa
cgcattacatcacttatttatgatgatgtaaaaggcacaggtaatcttaatttacgccgt
tacgagtccgttttaagcgacatgctcgaccctgcaggaacgtgccgttgcgacgcactt
attttgggttgcacagaattaagcgtgcttaatgaagctttccctcttccgcaaataccg
ttagttgacgctcaagcagtactcgtaaaaaatactgtagaaaaagctaaatctttgcga
atgaagtag
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