Gardnerella vaginalis 409-05: HMPREF0424_0535
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Entry
HMPREF0424_0535 CDS
T01146
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00270
Cysteine and methionine metabolism
gva01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HMPREF0424_0535 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gva03000
]
HMPREF0424_0535 (dcm)
03032 DNA replication proteins [BR:
gva03032
]
HMPREF0424_0535 (dcm)
03036 Chromosome and associated proteins [BR:
gva03036
]
HMPREF0424_0535 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
gva02048
]
HMPREF0424_0535 (dcm)
Enzymes [BR:
gva01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
HMPREF0424_0535 (dcm)
Transcription factors [BR:
gva03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
HMPREF0424_0535 (dcm)
DNA replication proteins [BR:
gva03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
HMPREF0424_0535 (dcm)
Chromosome and associated proteins [BR:
gva03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
HMPREF0424_0535 (dcm)
Prokaryotic defense system [BR:
gva02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
HMPREF0424_0535 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Eco57I
BMT5-like
Motif
Other DBs
NCBI-ProteinID:
ADB14000
LinkDB
All DBs
Position
571928..573001
Genome browser
AA seq
357 aa
AA seq
DB search
MQPTVIDLFSGVGGLSLGFEEEGFSVLLANEYDESIANAYMKNHKTTKMVVGDITSLDLD
AVFGTYKNKIDVIIGGPPCQGFSQKGQRKTIYDKRNFLFEYYVKVVELVKPKYFVMENVP
NLLTAEKGYFFNEIETLFNAMGYFLQHGVLNAADFGVPQNRKRAVIIGKMNGVAPSLPSS
LNEKVTIWDAISDLAFLESGEGDEVQEYRYAPQSEYEKKLRGHANLLYNHKATKHSPLSL
KRLRMIPPNAGKEVLPKEHLTKSIYSGTWTRMKKDDISVTITTRFDTPSSGKFTHPFLNR
AITVREAARIQSFPDEFIFIGSKSSQMRQVGNAVPPLLASAIARVIKNDIMEGNIDE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccaacggtaatagatttattttcaggcgtaggaggattatcgttaggctttgaa
gaagaaggattcagtgttcttttagctaatgagtatgatgaatccattgcaaacgcttat
atgaaaaatcataaaacaacaaaaatggtcgttggtgatattacctctcttgatttggat
gctgtttttggaacatataaaaataagattgacgtcattataggagggccaccttgccaa
ggcttttcgcaaaaaggtcagcggaaaacaatctacgataaaagaaattttttatttgaa
tattatgtaaaggtagttgagcttgtaaaacctaagtattttgtaatggagaatgtccca
aacctgcttactgctgaaaaaggttatttttttaatgaaattgagacgctatttaatgct
atggggtactttttgcagcatggagtacttaatgccgcggattttggagtaccacaaaat
agaaaaagagcagttattattggcaaaatgaatggggttgctccgtctttaccatcctcg
ctgaatgagaaagtaactatatgggacgcaattagcgacttggcatttttagaatcagga
gaaggtgatgaggtgcaagaatacagatatgcgcctcaaagcgagtatgaaaaaaaatta
cgtggacatgctaaccttttgtataatcataaggcaacaaaacactctccactttcatta
aaaagattgagaatgattcctcctaatgccggtaaagaagttttaccaaaagagcatcta
actaaatccatatatagtggtacgtggaccaggatgaaaaaagatgatatatccgtcacg
ataacaacaagatttgatacaccttcttcaggcaaatttactcatccttttttaaatcgg
gcaataacagtaagagaagcggccaggatacagtcattcccagatgaattcatattcatt
ggtagtaagagttctcaaatgagacaagttggtaatgctgttccgccactattggcatca
gcaatcgctagagtaattaaaaatgatattatggagggaaacattgatgaatag
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