KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0564
Entry
HMPREF0424_0564   CDS       T01146                                 
Name
(GenBank) toxin-antitoxin system, antitoxin component, HicB family
  KO
K18843  antitoxin HicB
Organism
gva  Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:gva00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gva02048]
    HMPREF0424_0564
Prokaryotic defense system [BR:gva02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HicA-HicB
    HMPREF0424_0564
SSDB
Motif
Pfam: HicB HicB_lk_antitox Arc FitA-like_RHH
Other DBs
NCBI-ProteinID: ADB13623
LinkDB
Position
complement(610514..610957)
AA seq 147 aa
MTKTNKSSKNISHKNKSKTLTNKRLSYYMSLPYKLEIVKDPDEGGFVSYYPDLPGCISSG
DSEQEAAANAQDAKHAWFEAALESKINIKEPSYHELNDYSGQFKLRLPKELHRQLAEQSQ
AEGISMNQYCVYLLSQNNAIERVLERA
NT seq 444 nt   +upstreamnt  +downstreamnt
atgactaaaacaaataaatctagcaaaaatatctctcacaaaaataagtccaaaacacta
acaaataaaagactcagctactacatgtcactcccatacaagctggaaattgtaaaagat
ccggatgaaggtggatttgtgtcctactaccctgatttgccaggatgcataagttcagga
gactccgaacaggaagcagcagcaaatgcgcaggacgctaagcatgcttggtttgaagca
gctcttgaaagcaaaatcaacataaaagagccgtcttaccatgagctgaatgactattct
ggtcaattcaaactgcgtctacctaaagaattacacaggcaattggctgagcaatctcaa
gccgaaggaataagcatgaaccagtattgcgtgtatcttctttcgcaaaataacgctatt
gaacgcgtgcttgagcgagcatag

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