Gardnerella vaginalis 409-05: HMPREF0424_0585
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Entry
HMPREF0424_0585 CDS
T01146
Name
(GenBank) ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
KO
K00936
two-component system, sensor histidine kinase PdtaS [EC:
2.7.13.3
]
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gva01001
]
HMPREF0424_0585
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gva02022
]
HMPREF0424_0585
Enzymes [BR:
gva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
HMPREF0424_0585
Protein kinases [BR:
gva01001
]
Histidine kinases
Other
HMPREF0424_0585
Two-component system [BR:
gva02022
]
Other families
PdtaS-PdtaR
HMPREF0424_0585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF_PdtaS
HisKA_2
HATPase_c
HATPase_c_2
HWE_HK
PAS_4
DUF4657
HATPase_c_3
RPN11_C
Motif
Other DBs
NCBI-ProteinID:
ADB14522
LinkDB
All DBs
Position
637179..638663
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AA seq
494 aa
AA seq
DB search
MADFSNILATRPDFNDSDREWLHHLVVDWQVIADLSFADLLLIIQNGDGDYVVAEQCRPS
TAITLRTDDLLGKKLDDSLVPELNEAMKSETSFHSSTLRSIGRATVCYVYAPVRHRGKTL
GLVMRETNLATRESNGRYETESINAGKTLFDMIPREQFPYRESVLNQRHNARVSDGFIVL
EDDGIVRYASPNAISCFRRLGGLNTMQGEYLSEFGTRLLHTNDNVPESLPLVLTGKADVD
CELEANHSIVSMRSLPLWGPNNRVGAVVLCRDVTEVLRREQELRTKNATISEIHHRVKNN
LQAVSALLRLQARKTKSIEVRKELEEAQRRVQTIALVHEGLSQTADEIVDFDKVISSLLK
MSIELASQNQNIDIDFVGKFGRLAAQDATPLSLVLTELVTNAVEHGFEGREKGHIRIAVG
RGGDNLNIVVEDDGDGIDSESSHGMAKPSGSGLGTQIINTFVTNDFGGTVRWSPRREGGT
RVVLDIKLRVSGIE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttttctaacattcttgctactcgtcctgattttaatgacagtgatcgtgag
tggcttcaccatttggtggtcgattggcaggttattgcagatttgagtttcgcagatttg
ctgctgattattcaaaatggtgacggtgattatgttgttgctgaacaatgtcgtccttca
acagctattactttgcgtactgatgatttgttaggtaaaaaattagatgattctttagta
cctgagcttaatgaggcgatgaaatctgagacaagtttccactcttcgaccttacgttct
attggtagagctactgtatgctacgtttatgctccagttcgtcataggggtaaaactctt
ggattggttatgcgcgaaactaatttggcaacgcgtgaatctaatggtcgttatgaaact
gaaagtattaatgctggtaagactttatttgacatgattcctcgtgaacaattcccatat
cgtgaatctgtattaaatcaacgacataatgctcgagtatccgatggttttattgtgcta
gaagacgatggaatagttcgttatgcttcccctaatgccattagttgtttccgcagactt
ggcggattaaacactatgcaaggtgaatatttaagcgaatttggcactaggttgttgcat
acgaacgataatgttcccgaaagtttacctcttgtattaactggaaaagctgatgtagat
tgtgaacttgaagcgaaccattctatagtttccatgcgctccttgcctctgtggggtcca
aataatcgtgttggagctgtagtgttatgccgtgatgttactgaagttttgcggcgcgaa
caagaattgcgtactaagaatgccactatttctgaaatacatcatcgcgtaaaaaacaat
ttacaggctgtttctgctcttttgcgtttgcaagctcgtaaaacaaaatctattgaagtt
agaaaagaacttgaggaagctcaacgtcgtgtgcaaactatagcactagttcatgaaggc
ttgagtcaaactgctgacgaaattgttgattttgacaaagttatttcgagtttgttgaag
atgtcaattgagttggcatctcagaatcaaaatatcgatattgattttgttggaaaattt
ggcagattagcagctcaggatgctacaccattatctcttgttttaactgagctagtgacg
aatgcagttgaacatggttttgaaggtcgtgaaaaaggtcatattcgtattgcagttggt
aggggcggagacaatcttaatattgtcgttgaagatgatggagatggtatagatagcgag
tcttctcatggaatggctaaaccatctggctctggccttggaacgcagattataaacaca
tttgtcactaacgattttggtggtacagttcgttggtctcctcgaagagagggcggaact
agggtagtgttagacattaaattgcgcgtatctggtattgagtag
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