Gardnerella vaginalis 409-05: HMPREF0424_0588
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Entry
HMPREF0424_0588 CDS
T01146
Name
(GenBank) cell envelope-like function transcriptional attenuator common domain protein
Organism
gva
Gardnerella vaginalis 409-05
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Gene cluster
GFIT
Motif
Pfam:
LytR_cpsA_psr
Motif
Other DBs
NCBI-ProteinID:
ADB13463
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Position
complement(641188..642486)
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AA seq
432 aa
AA seq
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MNSRLYEDPSEDNINPPIFTPSHNNDSSNSNVPPSFTPKRVKRGKIESNALPSQAPSFAP
TTQRTRILKSPEQCSSRPVSYTSQLQPRPAPRTSSISQMRIPTTINKAVGSTAKILPHKP
HRILHAFIAFFVVLAIGVTGFGVYSWNWVDSRINRTTWLTSTPSTQGKAWLILGSDQREG
EEAKEITGFRTDTILVLTKPSNGHSSLISIPRDSLVSLNGEQVKINSVAQAAGNKALTAA
IEKITGHRIDHVAEIRFGGLTNVVNAIDGIDLCYNRTVSDKFSGLNWTSGCHHVDGNTAL
AFSRMRYADPESDFGRAARQRMVIAAIMKKALDHNTLLNFGKVKKLAETGLASVIFDEKT
NPGTLWEMAQAFKEATGPSGISGTVYWTNPDYQVPGVGSSVLLDDAKNLDLFNQLASGTH
KPGSVGTLAEQQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgagattgtatgaggacccttctgaagataatataaacccacctatcttcact
ccttctcataataacgattcatctaactcaaacgtgcctcctagtttcactccaaaacgc
gtaaaaagaggcaaaatagagtctaatgcgcttccatcacaagcgccttcttttgcgcct
acaactcaaagaacaagaatcttaaaaagtccagaacaatgttcttctagacctgtttct
tacacatcgcaattgcaaccaagaccagcaccgcgcacaagttctatttcacaaatgcgt
attccaacaactataaataaagcagttggaagtacagcaaaaatactaccgcacaaaccg
cacagaattttacatgcatttattgcattttttgttgttctggcaataggtgtaactggt
tttggggtatattcatggaactgggttgactcaagaattaaccgcactacttggcttact
agtactcctagcactcaaggcaaagcatggcttattcttggctctgatcaacgagaaggc
gaagaagctaaagagataacaggatttagaacagatactattcttgtattgacaaagccg
agcaatggtcacagctctctaatttctattcctcgagattctcttgtttctttaaatggc
gaacaagtaaaaattaatagcgttgcgcaagcagctgggaataaagcattaacagcagca
atagaaaaaattacaggtcatcgcattgaccatgttgcagaaatacgttttggcggtctt
actaatgttgttaacgctatagatggcattgatttatgctacaaccgtacagtaagcgat
aagtttagcgggttaaattggacttctggatgccatcacgttgatgggaatacagcgtta
gcattttcgcgaatgcgatacgcagatccagaatctgattttggacgagctgcacgccaa
cgaatggttattgcagctattatgaaaaaagctttagatcacaataccttattgaatttt
ggaaaagtaaaaaagcttgctgaaacgggacttgcttcagttatttttgatgagaaaacc
aatccaggaacattatgggaaatggctcaagcattcaaagaagcaactggaccgtcaggc
atatctggaacagtatattggacgaatcctgactatcaagttccaggagttggttcatct
gtgcttctcgatgatgctaaaaacttagatttattcaaccaacttgcatcaggaactcat
aaacctggatcagttggaactcttgcagagcaacaataa
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