Gardnerella vaginalis 409-05: HMPREF0424_0597
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Entry
HMPREF0424_0597 CDS
T01146
Symbol
glgB
Name
(GenBank) 1,4-alpha-glucan branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00500
Starch and sucrose metabolism
gva01100
Metabolic pathways
gva01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
HMPREF0424_0597 (glgB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gva04147
]
HMPREF0424_0597 (glgB)
Enzymes [BR:
gva01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
HMPREF0424_0597 (glgB)
Exosome [BR:
gva04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HMPREF0424_0597 (glgB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
GlgB_N
Alpha-amylase
Malt_amylase_C
Glyco_hydro_70
Motif
Other DBs
NCBI-ProteinID:
ADB13584
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Position
complement(653781..656066)
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AA seq
761 aa
AA seq
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MIVSMSTVTNINEDAVAVPVRQDVLAAVSNAEYYNPHEVLGGHLGTGKGADTVTVRVLRP
MAKKVVILTKNGEYEAKHEYNGIFTAVIPAVKHTKTKSWSVPSYRVYTVEIDGSESTDDD
PYRYLPQVGELDMYLFGEGRHERLWEALGAHVKTITDSWGLISPETGKMVKKVTGTAFSV
WAPNARAVRVVGNFNYWNGRRHAMRSLGSSGIWELFIPGVTAGEVYKYEILTQSGNWIMK
ADPMERSHEVPPNTGSVVVDSEFKWHDTDWMDERAKTDAHNGPISIYEVQANSWNRDLGN
YRELADHLVDYVQREGFTHVEFMPLTQYPFSGSWGYQVTGYYAVDSRLGSPDDFKYLVDK
LHKAGIGVIMDWVPAHFPKDDFALGRFDGTALYEDPDPMRGEHPDWGTYIFNFGRHEVRN
FLVANACFWLDEYHVDALRVDAVSSMLYLDYSREAGQWRPNIYGGRENLEAIDFIKEANA
TAYKNNPGIMMIAEESTAYQGVTAPTDMGGLGFGLKWNMGWMHDTLQYLKEEPINRRWHH
NEITFSMVYAYSEHYVLPLSHDEVVYGKGSLLGKMPGDEWQQFAGLRALLAYQWSHPGKN
LLFMGGEIGQSSEWNFNTSLNWNELQWPFHQGVQKLVADLNTLYKSSRAFWSQDFTPDGF
QWLTSDDSDHNTLSYMRIGDDGEEIVVVVNFSGQAWQDYQVALPKDGQWEEILTTDDAKY
CGSNIHNGTFTATAAEYHSRPYSARITVPALGAVFLKPVQH
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcagcatgagtacagttactaacatcaatgaagatgcagtcgcagttccagtc
cgacaggatgtattagctgcggtgagcaatgcagaatattacaatccacatgaggttctt
ggaggtcaccttggaactggcaaaggtgccgacactgtaaccgtccgcgtattgcgccct
atggcaaagaaagttgttattcttactaagaacggtgaatacgaagctaaacacgaatat
aacggcatctttacagctgttattcctgcagtaaagcatacaaaaacaaagtcttggtct
gttcctagttatcgcgtttacactgtggaaatagacggttctgagtccacagatgatgat
ccttaccgttatttgcctcaagttggcgaacttgacatgtacttatttggagaaggtcgt
catgagcgtctttgggaagcattaggcgcacacgtcaaaacgataacagattcatgggga
cttatatctcctgaaactggaaagatggtaaagaaagttactggtactgctttctcagtg
tgggcaccaaatgctcgtgcagtacgcgtagttggtaactttaattactggaatggtcgt
cgccacgctatgcgttcactcggctcttctggcatttgggaactttttattccaggagtt
acagcaggagaagtatataagtacgaaattcttacacaatctggcaattggattatgaaa
gccgatccaatggagcgctctcatgaagttccaccaaacacaggatctgttgttgttgat
tctgagtttaagtggcacgatactgattggatggatgagcgcgcaaaaacagatgctcac
aatggtccaataagcatttacgaagtacaagctaacagctggaatcgcgatttgggtaat
tatcgcgaacttgctgatcatttagttgattatgtgcaaagagaaggctttactcacgtc
gagtttatgccgttgacacaatatccattctctggatcttggggatatcaagtaacgggt
tattatgcagtagattctcgccttggctcccctgatgactttaagtacttggtagataaa
ctccacaaagcaggcattggcgtcattatggattgggttccagctcacttccctaaggat
gactttgcactcggtcgttttgatggcacagcattatatgaggatcctgatcctatgcga
ggtgagcatcctgattggggtacttacatcttcaactttggtcgtcatgaagttcgtaac
ttcttggttgctaatgcttgcttctggcttgatgaataccatgttgacgcgttgcgcgtt
gatgcagtatcctcaatgctttacttggattacagccgtgaagcaggacagtggagacca
aacatctacggcggacgcgaaaatcttgaagcaattgacttcattaaggaagcaaacgca
actgcatacaagaataatcctggcatcatgatgattgctgaggaatccactgcttatcaa
ggcgtaactgcaccaaccgatatgggcggcttaggattcggcttgaagtggaatatgggc
tggatgcacgacactttgcaatatcttaaagaggaaccaattaatcgtcgttggcatcat
aacgaaattacattctcaatggtttatgcatactctgagcattatgtgttgccattaagc
cacgatgaagttgtgtacggtaagggttcgttacttggaaagatgccaggagacgaatgg
caacagttcgcaggattacgcgcattgcttgcataccagtggtctcatccaggcaagaac
cttctgttcatgggtggagaaattggacagtccagcgaatggaacttcaatacttctctt
aactggaatgagctgcaatggccgttccatcaaggtgtgcaaaagcttgttgcagatttg
aatactctgtataagagctctcgcgcattctggagtcaagactttactcctgatggtttc
cagtggcttacaagcgacgattccgatcacaatactttaagctacatgcgtattggcgac
gacggagaagaaatcgttgtagtagtaaacttctcaggtcaagcttggcaagactatcag
gttgcgttaccaaaagacggacagtgggaagagatactcacaactgatgatgcaaagtat
tgcggatctaatattcacaacggcacattcactgctactgctgcagagtatcattctcga
ccatactctgcaagaatcactgttccagcgttaggtgcggtattcttgaagccagtacaa
cactga
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