Gardnerella vaginalis 409-05: HMPREF0424_0601
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Entry
HMPREF0424_0601 CDS
T01146
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HMPREF0424_0601 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
gva03011
]
HMPREF0424_0601 (rpsA)
Ribosome [BR:
gva03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HMPREF0424_0601 (rpsA)
Bacteria
HMPREF0424_0601 (rpsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ADB13901
LinkDB
All DBs
Position
659204..660706
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AA seq
500 aa
AA seq
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MAENNNEVAKVAINDIGTEEDFIKAVDSTIKNFDDGDLVEGTVVKIDHDEVLLDIGYKTE
GVIPSRELSIKKDVDPDDVVEVGDTIEALVVTKEDKEGRLILSKKRAQYERAWGDIEKIK
DADGIVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELDKNR
NNVVLSRRQFLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHVSEL
SWKHIDHPSEVVKVGDKVTVEVLDVDLDRERISLSLKATQEDPWQRFARTHVPGQVVKGK
VTKIVQFGVFISVEDGIEGLVHISELANRHVENPETVVKGGEEVFVKVIDVDLDRRRISL
SLKQATEAVDPNSEDFDPALYGMPAEYDAEGNYKYPEGFDPNTNEWMVGYEQQREEWEAQ
YAAAHQLWEEHKAFAAKELAAAAESAAADGQSEEAEKKPAKEEKKEEVASNYSSEATSEG
ALADSDQLAALREQLLNEKK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaataataacgaagtcgccaaggttgcgattaatgatattggcaccgaagaa
gacttcatcaaggcagtcgattcaaccatcaagaattttgatgatggtgatttagttgaa
ggtacagtcgtaaagattgatcacgacgaagtattgctggacatcggctacaaaactgaa
ggtgtaattccttcccgtgaactttccatcaaaaaagacgttgatccagatgatgttgtc
gaggttggcgacaccattgaagcccttgttgtaactaaggaagacaaggaaggacgtctt
attctctccaagaagcgtgcacagtatgagcgtgcttggggtgacatcgagaagattaag
gatgcagacggcatcgttgaaggtaccgttattgaagctgttaagggcggcttgattgtt
gatatcggtcttcgcggcttcttgccagcttccttggttgagatgcgtcgcgtgcgcgat
ctttctccatacattggccagaagattaaggctaagattctcgagctcgataagaaccgc
aacaatgttgtgctttctcgtcgccagttccttgaggaaacccagtccgaagttcgcgag
accttcctctcgcagcttaagaagggtcagattcgcgaaggcgttgtgtcttctatcgta
aacttcggtgcgtttgttgatctcggcggagttgacggtctcattcacgtgtctgagctt
tcttggaagcacatcgatcacccatctgaggttgttaaggttggtgataaggttaccgtt
gaagttctcgacgttgatctcgatcgcgaacgtatttccctttcccttaaggcaactcag
gaagatccatggcagcgcttcgctcgcactcatgttcctggacaggtcgttaagggcaag
gtcacaaagattgttcagttcggtgtgttcatctccgttgaagatggcattgagggcttg
gttcacatttctgagcttgcaaaccgtcacgtagagaacccagaaactgttgttaagggt
ggcgaagaagtattcgtgaaggttatcgacgttgatctcgatcgtcgtcgcatctccctc
tccttgaagcaagctactgaagctgtagatccaaattctgaagattttgatccagctctc
tacggtatgccagctgaatatgatgctgaaggcaactacaagtacccagaaggcttcgat
ccaaacactaacgaatggatggtcggttacgagcagcagcgcgaagagtgggaagctcag
tatgctgcagcacaccagctttgggaagagcacaaggcattcgctgctaaggaacttgcg
gctgcagctgaatctgctgctgctgacggtcagagcgaagaagctgaaaagaagccagct
aaggaagaaaagaaggaagaagttgcttccaactattcttctgaagcaactagtgaaggt
gctttagctgattctgatcagctcgcagctttgcgtgaacagcttttgaacgaaaagaag
tag
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