Gardnerella vaginalis 409-05: HMPREF0424_0619
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Entry
HMPREF0424_0619 CDS
T01146
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00500
Starch and sucrose metabolism
gva01100
Metabolic pathways
gva01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
HMPREF0424_0619 (glgX)
Enzymes [BR:
gva01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
HMPREF0424_0619 (glgX)
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Motif
Pfam:
CBM_48
Alpha-amylase
ISOA1-3_C
Isoamylase_C
pulA_all-beta
Cellulase
Motif
Other DBs
NCBI-ProteinID:
ADB14520
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Position
686139..688268
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AA seq
709 aa
AA seq
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MHIRPGSMYPLGANYDGAGVNFALFSEVAKRVELCLFDEHDNETRIDMTEQNSYVWHNYV
SGIQPGQRYGYRVHGPYDPSHGLWCNPHKLLLDPYAKAIEGNIDGDESLFSYWFDNPDDI
SAMNTLDSADHTMKAAVINPYFDWGNDQHPMIPYHDSVIYEAHVRGMTNLDKRVPPDIRG
TYAGLAHPSVISYLRKLGVTAIELMPIHQFVNDSFLQNKGLSNYWGYNTIGFFAPQNSYS
SSGQRGEQVNEFKSMVKAYHAAGMEVILDVVYNHTAEGNDRGPTLSFRGIDNRAYYRLVD
NDQRHYFDTTGTGNSLLMRSPKALRLITDSLRYWVTEMHVDGFRFDLAATLARQFQEVDK
LSAFFDIIEQDPIISSVKLIAEPWDIGVGGYQVGGFPPSWSEWNGRYRDCVRDFWRSQPS
TLPEFASRLMGSSDLYEQNGRKPVASVNFITAHDGFTMNDLVSYNEKHNEANKEGNCDGA
NDNRSWNCGVEGPTNIHDVNELRERQIRNLFSTLLMSQGIPMICAGDEVMRTQKGNNNAY
CQDNAISWISWDYNETQRDMFDFVSKLIHLRLKHPVLHRRRFFTGRSAGDDVSDIPQVEW
LDHNGTVMDMEDWSNTHALSVMIYLNGSDIPETDWYGTRMVDNDFILIFNAHYEPITFTL
PDKRYGEKWKLIVDTYNPKGPELLYEAGFNIVAQSRSFLLLMSEHKPEH
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcatatacgaccaggttccatgtatccgcttggcgcaaactatgatggcgctggcgtg
aattttgcgctgttttccgaagttgcaaagcgcgttgaattatgtttatttgatgagcat
gataacgaaacacgtattgatatgactgagcagaactcatacgtgtggcataactatgtt
tcaggcatacagcctggtcagcgttatggttatcgtgttcacggaccttatgatccttct
catggtttatggtgtaatcctcataagttgttgcttgacccatatgccaaggcgattgaa
ggaaatatagacggtgatgagagtcttttctcgtattggtttgataatccagatgatatt
tcagcaatgaatactttggattctgcagaccatacgatgaaggctgcagttattaacccg
tattttgattggggtaatgatcagcatcctatgattccgtatcatgattctgttatttac
gaagctcatgttcgtggaatgactaatcttgataaacgtgttcctccagatattagaggc
acttatgctggacttgcacatccaagcgttatttcttatttaaggaagcttggtgttact
gcaatagaattgatgcctattcatcagtttgtaaatgattctttcttgcaaaataaagga
ttaagtaactactggggatacaatactattggtttcttcgctcctcaaaattcttactcc
agttctggtcagcgcggagagcaggttaacgaatttaaatcaatggttaaggcatatcat
gctgcaggtatggaagttattctagacgtggtttacaatcacactgctgaaggcaatgac
cgtggccctactttgagtttccgtggtattgataatcgcgcatattatcgccttgtagat
aatgaccagcgtcactattttgatactaccggtactggtaattccttacttatgcgttct
ccgaaagcattgcgattgatcacagatagtttgcgttattgggtaactgaaatgcatgtt
gatggcttccgtttcgatttagcagcaactcttgcgcgtcagttccaagaagtagataaa
ctttctgcattctttgacattattgagcaggatcctattatttcaagtgtaaaacttatc
gctgagccttgggatattggtgttggtggatatcaagttggtggattccctccaagttgg
tccgaatggaatggaagatatcgcgattgtgtccgcgacttttggcgttcacaaccatct
acattacctgaatttgccagtagacttatgggtagctcagatttatatgagcaaaatgga
cgaaagcctgtagcttccgtgaactttattacagctcacgatggcttcactatgaacgat
ttagttagctataacgaaaagcataatgaagctaataaggaaggcaattgcgatggtgcg
aacgacaatcgttcgtggaattgcggtgttgaaggacctactaatattcacgatgttaat
gaattgcgtgaacgtcaaatacgtaatttgttctcaactcttttgatgagccagggcatt
cctatgatatgcgctggtgatgaagtcatgcgtacgcagaagggcaataacaatgcttat
tgtcaagataacgctatttcgtggataagttgggattataacgaaactcaacgagatatg
ttcgatttcgtttccaagcttattcacttgcgattaaagcaccctgtgttgcatcgtcgt
cgtttctttacgggtcgttctgctggagatgatgtaagcgatattccacaagttgaatgg
cttgatcataacggtactgttatggatatggaggactggtcaaatactcatgctttatct
gtgatgatttatttgaatggttcggatattccagaaactgactggtatggaacgagaatg
gttgataatgactttattcttatttttaatgcgcattatgaacctattacttttactttg
ccagataaacgttatggtgagaagtggaagttgattgtggacacatataatccaaagggt
ccagaattgttatatgaggcaggatttaatattgttgcacaatctcgtagtttcttgctt
cttatgagtgagcataaaccagaacattaa
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