Gardnerella vaginalis 409-05: HMPREF0424_0642
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Entry
HMPREF0424_0642 CDS
T01146
Name
(GenBank) efflux ABC transporter, permease protein
KO
K02004
putative ABC transport system permease protein
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gva02000
]
HMPREF0424_0642
Transporters [BR:
gva02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
HMPREF0424_0642
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Gene cluster
GFIT
Motif
Pfam:
FtsX
Motif
Other DBs
NCBI-ProteinID:
ADB14031
LinkDB
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Position
715809..718502
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AA seq
897 aa
AA seq
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MWKIALKLMRKSVRMLIASGIAILIGSMFMSATLLFVNSVDDLMVRNATEEFHSANYAIS
SKSSNSSPNSGIHYKDLHLDEISKMPGVNGIRSDDATALVGVEKGDKSVTSIAWSSGLYG
NLPVYKSTEGRDPQKIGEITLIKSIAKSIHANIGDTITLVKVDEAGGNKEKSYDVRVVGL
VDDGEHSQIPISNRGTYLGGITNDFCAKLNNLKNFDNQVVQSKVYMSIDESKINDLSPKI
NALLPEQFSLMSRHEVGVRAVRSVSNGTNFVTMFLLSFGVLALLISSLVIANTFQVLVAQ
RRRTLALLRVIGAQSHQLYTAVLLEAAILGVISAAIGVLCAIGFMGAISNLNINSGPLSK
IPLIVSLPAIVWPIVIGAIVTVLASMGAARSATKVTPMEALRPMDLMKDKRASIIRAVFG
VLFIVVGILFTALSSTSLASMIAQQSPNAGADSWRTLIGAVFGCALVFIGIIITATFWMP
FAMKATGAVMALCGPASKVANANVQRNPRRVAATGTALLIGVTLVSTVVTGAICGKATLK
GVVDDRYSVDIIIQGKNVDESLAADISKISGIKHTELLPAVPMTFKNAKGKTEYAMAAGV
DNVNQLRNVMHTDLDGVNINKDSVLLPKFNDEGGEPFDLKKGSLNLQAYVEKYSSGETDS
DNITPFTGMNTDSSNNDKSITVKQVQFKKYRNVGVYSNNTAFVSKSYFNNYLKPTTHILL
ISVDSSKANLVDIAKNIRNVTSSYAEVVSTGSVFERAKWESTIDAMMMALVGLIAVAVVI
ALIGVANTLSLSVIERTKESATLRAIGMTRGQVRRSLALEATLISLTSTVSGLIVGTAFG
WIGSYMVFSTIGKVPFVVDWTIYAVLALIALLAALLSSVLPARRAVKSSPVVALAED
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaatcgcgctaaaacttatgcgtaaaagcgtgcgcatgctaatcgcctctgga
attgcaattcttataggcagcatgtttatgagcgctactttgctttttgtaaacagtgtt
gacgacttgatggttcgcaatgcaacggaagaattccatagcgcaaattatgcaatctca
tctaaaagctctaacagttctccgaatagtggaattcattataaagaccttcatttagac
gaaatatcgaagatgcctggtgtcaacggtattcgtagtgacgatgcgactgcgcttgta
ggagtagaaaaaggtgataaatcagttacaagtattgcttggtctagtggtttgtatgga
aatcttcctgtgtataaatcaacagaaggtagagatccgcaaaaaataggcgaaattacg
cttattaaaagtattgctaaatccatacatgcaaatattggcgatactataaccttggtt
aaagtagatgaagctggcggaaataaagaaaaatcatacgatgttcgtgtggttggtctt
gttgacgatggagaacattctcaaataccaatttcaaatcgcggcacgtatcttggtggc
ataacgaatgatttttgtgcaaaactcaacaatcttaaaaattttgacaatcaagttgtg
caaagcaaagtgtacatgagtattgatgaatctaaaataaacgatttatctcctaagatt
aacgctttgcttccagagcaattttctcttatgtctaggcacgaagttggtgtaagagct
gttcgaagtgtgtcaaacggcacaaattttgtgactatgttcttgctatcgtttggtgtt
ctagcgttgcttatttcttcgcttgttatagcaaacacattccaagttttggttgctcaa
cgcagacgcactcttgcgcttttgcgcgtaatcggtgcacaatcgcatcagctttataca
gcagttttgcttgaagctgcaatacttggagttatttctgcggctattggcgtgctttgc
gcaataggatttatgggcgcaattagtaacttgaatattaattctggaccattatctaaa
attcctttgattgtttcacttccggcgattgtgtggccaatagtaattggcgcgattgta
acagttcttgcatctatgggtgctgcgcgatctgctacaaaagtaacgcctatggaagcg
ttgcgaccaatggatttgatgaaagataagcgtgcaagcattattcgcgctgtttttggc
gttctatttattgttgtaggtattttatttacggctttaagttctacttctttggcaagc
atgattgctcagcagtcacctaatgctggtgctgactcttggaggactttgattggagca
gtttttggatgcgcgcttgtgtttattggaattattattacagcaacattctggatgccg
tttgctatgaaggcaactggcgcagttatggcactttgtgggcctgcttctaaagttgct
aacgcaaacgtgcaacgaaaccctagaagagttgcagcaactggaacagctttgcttatt
ggcgtaactcttgtttcaacagtagtaactggcgcaatctgcggtaaagcaactcttaaa
ggtgttgttgatgaccgttacagtgttgacattattattcaaggcaagaatgttgatgaa
tctttagctgccgacatttcaaagattagtggaataaagcatactgagttgcttcctgca
gttcctatgacttttaagaacgctaagggcaaaactgagtacgctatggcagctggagtt
gataatgtaaatcaacttagaaatgtaatgcacactgaccttgatggcgttaatataaac
aaagattctgtgcttttgcctaagtttaatgatgaaggtggagagccttttgatcttaaa
aaaggaagtcttaatctgcaggcttatgtagaaaagtacagttctggtgaaacagacagt
gataatattacgccatttactggcatgaatacagactctagtaataacgataagagcatt
actgtaaagcaagttcagtttaagaagtatcgaaatgttggtgtgtattcaaataatact
gcttttgtgagcaaatcctacttcaataactaccttaagcctacaacgcatattttgctc
atttcggtagactctagcaaagctaatcttgtagatattgctaaaaacattcgaaatgtt
acatctagttatgcggaggttgtgtctactggaagcgtgtttgagcgagcaaagtgggag
agtactatcgacgcaatgatgatggcgcttgttggcttaatagcagtagctgttgtgatt
gctttaataggcgttgcaaacacattaagcttgtctgttattgagcgaaccaaagaatct
gcaactttgcgcgcaatcggcatgacaaggggacaggttagaaggtctcttgcattggaa
gcaacgttgatttccttaacaagcactgtttcaggcttgattgttggaacagcatttggt
tggattggatcctacatggtatttagcacaattggcaaagttccgtttgtagttgattgg
actatttacgcggttcttgctctcatcgctttgcttgcagctcttctttccagcgtgctt
ccagctcgtagagcagtgaagtcttcgccagtagttgcgctcgcggaggactaa
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