Gardnerella vaginalis 409-05: HMPREF0424_0643
Help
Entry
HMPREF0424_0643 CDS
T01146
Name
(GenBank) hypothetical protein
Organism
gva
Gardnerella vaginalis 409-05
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
TMF_DNA_bd
DUF1664
GAS
Motif
Other DBs
NCBI-ProteinID:
ADB13548
LinkDB
All DBs
Position
718888..720855
Genome browser
AA seq
655 aa
AA seq
DB search
MVTVKKKSAAAIAGFVLFLQGPMPAWAQEAAEVVQNTQAQTEVTAKASTENKLLQVEHNI
EELKSKIDEQTKNLEDVVNKLNKTIENINTFTKGIAKKEKELDGINKVIGTDLAQAQAVL
KDLKKKKQLKEVELKSLEIQKEQSKDNYEKSKNELDSLISLESEESSKKDSYEKIYKNYE
NKMQNLNSDIKVLSEEIEKDRAALLKLSAKVDEDAKALEDAEHQDNADFDKLRSNLENAD
KEFNSLNQEIGVKKLKLSDMNSSLTQLEPKFNEAVKSFEEQSKQLESIKQDLDIAKQDTE
DKLKDLNDKTSSIENIKEELSAIEVDINSYELSNNESERNKKIEGLRTNIAVLKDLLKNF
QVQKVDNEKAKKNLEDTLNDLKNQHSLALAELDALKASQSEKKKSSESDSTSPVPKRNNS
DSQTQSNDSERRIAPNNPQSSVNSKDNADSSMHPKVSTPSDVETSGAPSVKHSGTSSKTP
SEAPSSATKETSSSSESYVPPVTAVEEQKQNENISQEQPAAQSSNPVRTVAVKDIVSEDA
ADKQSKPVESKTVESAKPSAKTSESNVAKENAKTAESTETAENDDVQDRPANETDEKISD
TVSEKPKTQASATSENKSSGNMLSNIMLGVLGVLTISGAAAAGVTVMRHRRLPRA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggtaacggtcaagaaaaaatctgccgcagcaatcgcaggatttgttttgttcctgcaa
ggtccaatgccagcatgggcgcaagaagctgctgaggttgtacaaaatacgcaagctcaa
acagaggtgactgcaaaagcatctactgaaaataaattattgcaagttgagcataacatt
gaagaattaaagtctaaaattgatgagcaaactaaaaatcttgaagatgtagtaaataag
ttaaataagactatagagaatattaatacttttacaaaaggtattgctaaaaaagaaaaa
gaacttgatggaataaataaagttattggaactgatttagctcaagcacaagctgttcta
aaagatcttaagaagaaaaagcagctaaaagaagtagaacttaaaagtcttgagattcag
aaagaacagtctaaagataattatgaaaaatcaaaaaatgaattagattctcttatttct
cttgagagtgaagaatcttctaagaaagattcatacgagaaaatatataaaaactatgag
aataagatgcagaatcttaattcagacattaaagttctttctgaagaaatagaaaaggat
agagctgctctgctaaaacttagtgctaaagtagatgaagatgcgaaagcattggaagat
gcagagcatcaagataatgcagattttgataaattgcgttctaatcttgaaaatgctgac
aaagagtttaattctttaaatcaggaaattggtgtaaagaaacttaagcttagcgatatg
aattcttctttaactcagcttgagcctaagtttaatgaagctgtaaagtcgttcgaagaa
caatctaagcagcttgaaagtattaagcaagatttagacattgcaaaacaagatacagaa
gataagcttaaagatttgaatgataagactagttctattgaaaacattaaagaagagctt
tctgcaatagaagtagatatcaacagttatgagctttctaataatgaatctgaaagaaat
aaaaagattgaaggtttgcgaacaaatattgctgtacttaaagatcttctaaaaaatttc
caagttcaaaaagtagacaatgaaaaagcaaagaagaatttagaagatactttgaatgat
cttaagaatcagcatagtcttgcattagctgaacttgacgctttgaaagcttctcaatcg
gaaaagaagaagagctctgaaagtgactctacttcacctgttcctaaaagaaataattct
gattctcaaacacaatctaatgattctgaaagaagaattgctcctaataatccgcaatct
tctgtaaattcaaaagataatgctgattcttctatgcatcctaaagtttctactccttct
gatgtagaaacttcgggagcgccttctgtaaagcattctggaacttcttctaaaactcct
tctgaagcgccttcaagtgcgactaaagaaacctcttcttctagtgaaagctatgttcct
ccggtaactgctgttgaagaacagaaacagaatgagaatatttctcaggagcagcctgca
gctcagtcttctaatcctgttcgtactgttgcagtaaaggatattgtttctgaagatgct
gcagataagcagtcaaagcctgttgaaagcaagactgttgaatctgcaaagccttctgca
aagacttctgaatctaatgtggctaaagaaaacgctaaaactgcagaaagtactgaaact
gccgaaaatgatgatgttcaggatcgtcctgctaacgaaactgacgaaaagatttcggat
acagtaagcgaaaagccaaaaactcaagctagtgctacaagcgagaacaagtcttctggc
aatatgcttagcaatataatgttgggtgttttgggtgtgctaactatttctggagctgct
gctgccggcgttactgttatgcgtcaccgtcgccttccgagagcataa
DBGET
integrated database retrieval system
