Gardnerella vaginalis 409-05: HMPREF0424_0671
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Entry
HMPREF0424_0671 CDS
T01146
Symbol
pheS
Name
(GenBank) phenylalanine--tRNA ligase, alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0424_0671 (pheS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gva01007
]
HMPREF0424_0671 (pheS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gva03016
]
HMPREF0424_0671 (pheS)
Enzymes [BR:
gva01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
HMPREF0424_0671 (pheS)
Amino acid related enzymes [BR:
gva01007
]
Aminoacyl-tRNA synthetase
Class II (U)
HMPREF0424_0671 (pheS)
Transfer RNA biogenesis [BR:
gva03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF0424_0671 (pheS)
Prokaryotic type
HMPREF0424_0671 (pheS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
Phe_tRNA-synt_N
tRNA_synthFbeta
Motif
Other DBs
NCBI-ProteinID:
ADB13604
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Position
754577..755731
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AA seq
384 aa
AA seq
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MSEKYNFGQYFAISYINNEYTYNTDRKGAVTDNKPFDIKAVSKAVKEGIASVTAAQTMEE
LKAVKTKYAGAQSVMTVASKAIGSLLADQKKEVGKVMSTLRADFGRAFAEATERIKAVEE
ANMLSAETVDMTLPINRKPLGARHPIARIIEDFEDFFVSMGWQISAGPEVETEWFDFDAL
NFGPDHPARQMQDTFYVQGNQAKDAAGFVGSNMVLRTQTSSDQVRALIERGVPLYIASPG
RVFRTDELDATHTPVFHQCEALAVDKHLTMADLKGVLDRLAVAMFGPDAKSRLRPSYFPF
TEPSAELDLWFPDKKGGPGWIEWGGCGMVNPNVLKSAGLDPQVYTGFAFGVGLERTLLLR
HDINDMHDLVEGDKRFSEQFVMGE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaatataactttgggcaatattttgcaatatcgtatataaacaatgaatat
acgtataacacagataggaagggtgctgtgaccgataataagccattcgatattaaagct
gtaagtaaagcagtaaaagaaggtattgctagcgttacagctgctcaaactatggaagag
ctgaaggctgttaaaactaagtatgctggcgcgcagtcagtgatgactgttgcaagtaaa
gcaattggttctttgcttgcggatcaaaagaaggaagttggcaaggtgatgtcaactttg
cgagctgattttggtcgagcttttgcagaagctacagagcgaattaaagctgttgaagag
gctaacatgctttctgcagaaactgtagatatgactcttccaattaatcgtaagccttta
ggtgctcgtcatcctattgctcgtattattgaggattttgaagacttctttgtgtctatg
ggttggcagatttctgcaggtccagaagttgaaactgaatggtttgatttcgatgcattg
aactttggtccggatcatcctgcgcgtcaaatgcaagatactttctacgttcagggtaat
caagctaaggatgctgcaggctttgtcggttcaaatatggttttgcgcacgcaaacttct
tctgatcaagtacgtgcgttaattgagcgtggagttcctctgtatattgcttctcctggt
agagtgttccgcactgatgaactggatgcaacgcatactccagttttccatcaatgtgaa
gctttggctgtagataagcatttaacaatggctgatttaaagggtgttctcgatcgttta
gctgttgcgatgtttggtccagatgcaaagagccgcttgcgaccaagctacttcccattt
actgagcctagtgctgagctggatctttggttcccagataaaaagggcggtccaggctgg
attgaatggggcggttgcggaatggttaaccctaatgtgttgaagtctgcaggtttagat
ccacaagtgtataccggttttgcttttggtgtcggcttggagaggactctgcttcttcgc
cacgatattaacgatatgcatgatttggttgaaggcgataagcgcttcagtgaacagttt
gtaatgggggagtaa
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