Gardnerella vaginalis 409-05: HMPREF0424_0690
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Entry
HMPREF0424_0690 CDS
T01146
Name
(GenBank) polyprenyl synthetase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00900
Terpenoid backbone biosynthesis
gva01100
Metabolic pathways
gva01110
Biosynthesis of secondary metabolites
Module
gva_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HMPREF0424_0690
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
HMPREF0424_0690
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gva01006
]
HMPREF0424_0690
Enzymes [BR:
gva01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HMPREF0424_0690
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HMPREF0424_0690
2.5.1.29 geranylgeranyl diphosphate synthase
HMPREF0424_0690
Prenyltransferases [BR:
gva01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HMPREF0424_0690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
MTHFR_C
CAMSAP_CC1
Motif
Other DBs
NCBI-ProteinID:
ADB14250
LinkDB
All DBs
Position
complement(779430..780536)
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AA seq
368 aa
AA seq
DB search
MSTFIGNNYSLNDIESRITFLISQQFNTGLENNLSSTCAQILQQVIKQAIVSSEGGKRLR
ALLTISAFYAASKETNIQKIHEQSVFDIACALEVFQTAALIHDDIIDESYLRRGKPSAYC
ALSKVCNNKHIGTGLGLMLGDLLATESFDIARNRAKNFTYGEELLAAFASMQRNVGIGQV
LDLSIEMMQLDNPIQLAESSLNVFRWKTASYTTVAPLTLGFLAANMQPTEAYNLANSIGN
SLGVAFQIADDLLDIVSDSKITGKPIGGDIREGKRAVLLADALQYGNDNEREILLKAYTS
STRSEDDVNKIIQIYHTSGAIEKSKKRIENLWNDSQQAIESSTLSDSGKAILHEISKRFI
PEAWRNVQ
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatttataggcaacaattacagtcttaacgatattgaatctagaattactttt
ttaatttctcagcaatttaatacgggattagaaaataatctttcatccacatgtgcgcaa
atactacagcaagtaataaagcaagctattgtttcaagcgaaggcggaaaacgtcttaga
gctcttcttacgatttcagcattttacgctgcatcaaaagaaaccaatattcaaaaaatc
catgaacagtctgtatttgacatagcttgtgctctagaagtatttcaaacagctgcatta
attcatgatgatattattgacgaatcttatttaagacgtggaaagcctagtgcgtattgt
gcattaagtaaagtttgcaataataagcatattggcacaggcttaggtttaatgctggga
gatctacttgccacagaaagtttcgatattgcaagaaatcgtgcgaagaattttacttat
ggcgaggaattgttagcagcatttgcgtctatgcaaagaaatgttggtattggtcaagta
ttggatttgtcaatagaaatgatgcaactagataatccaatacaacttgcggaatcatct
ttgaatgtttttagatggaaaacagccagttacactactgttgctccattaactctcggc
tttcttgcagcaaatatgcaaccaactgaagcatacaatcttgctaattctattggcaat
tcgttaggtgttgctttccaaattgctgatgatttgcttgatattgtttcagatagcaag
attacaggtaagcctattggcggtgatattagagaaggtaagcgtgcggttcttcttgca
gatgctttgcaatacggaaacgataacgaaagagaaatactattaaaagcttacacgagt
agtactcgaagcgaagatgatgtaaataaaataatacagatttaccatacttctggtgct
attgaaaaatcaaaaaagcgaattgagaatctgtggaatgattcacaacaagcaatcgaa
tcaagtacattgagcgacagtggaaaagctattttgcatgaaattagcaaacgatttata
cctgaagcatggcgtaatgtacaataa
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