KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0811
Entry
HMPREF0424_0811   CDS       T01146                                 
Symbol
def
Name
(GenBank) peptide deformylase
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
gva  Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:gva00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    HMPREF0424_0811 (def)
Enzymes [BR:gva01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     HMPREF0424_0811 (def)
SSDB
Motif
Pfam: Pep_deformylase
Other DBs
NCBI-ProteinID: ADB13482
LinkDB
Position
complement(913531..914019)
AA seq 162 aa
MSIRKIRIVPDPVLRTPCDEIREITPAVKHLVDDLLETVNDPGRAGLSANQIGVSFRAFS
YNINGRIGYILNPVIEELKGEQYDDEGCLSVPGLWYKTRRANYARARGIDLDGKTVVLEG
EGLMARMIQHECDHLDGHIYLDRLEKDVRRQALRELRNNMRS
NT seq 489 nt   +upstreamnt  +downstreamnt
gtgtctattagaaaaattcgtattgttccggatcccgtattgcgaactccttgtgatgag
attcgtgaaattacgccagctgtgaaacatttagttgatgatttattggaaacggtaaat
gatccaggtagagctggattgtctgctaatcagattggtgtaagttttagagctttttct
tacaatataaatggtcgaattggctatattctaaatccagtaattgaagagctaaaaggt
gaacagtacgacgacgagggttgcctttctgttccgggattatggtacaaaactaggcgt
gcaaattatgctagagctcgtggaattgatttagatggtaagactgtagtgcttgaaggt
gaaggtcttatggctagaatgattcagcatgagtgtgatcatttagatggtcatatttat
ttagataggcttgaaaaggatgtgcgccgtcaagcgttgcgtgagttgcgcaataatatg
cgtagctaa

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