Gardnerella vaginalis 409-05: HMPREF0424_0824
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Entry
HMPREF0424_0824 CDS
T01146
Name
(GenBank) cobalt ABC transporter, ATP-binding protein
KO
K24040
energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gva02000
]
HMPREF0424_0824
Transporters [BR:
gva02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
HMPREF0424_0824
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
CbiQ
AAA_21
SMC_N
ATP-synt_ab
AAA
AAA_16
AAA_29
NACHT
RNA_helicase
RsgA_GTPase
NPHP3_N
AAA_22
nSTAND3
Mg_chelatase
AAA_15
AAA_5
NB-ARC
AAA_33
MMR_HSR1
AAA_13
AAA_18
AAA_23
Sigma54_activat
TIP49
AAA_7
Methyltransf_32
NTPase_1
DUF5906
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADB13469
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Position
932097..934409
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AA seq
770 aa
AA seq
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MNEAKKHMIENNAQVVLRNICYSYDDGKTWTLNNLSLTINAGERLAIVGLNGSGKSTLAK
IIAGLTAPDSGYVTLCGEKVFENTTACAESYKNARKYIGALFQSPEDQIITTITEEDVAF
GLENLQFPQKAMYKRISEALKTVHMEDKRYADPSTMSGGQQQRVALASAIAMNSKLLVLD
EPTSMLDSFARKDVDALFDNLHKNGTTIVQITHNFEECKRANRILLLENGILKEVSFNGL
KTYFSNIELANNHLTKISESKNLTDSRRKENESDIAVEISGLTVQYDKTSPAVIDDYSLT
VKNGETVAIMGENGCGKSTLAKTMCGLLKANSGNITVHGISVRGKTSKIIRQKLHQTIGY
VMQLPEQQLFADTVRNDVAYGPKNFGLKGNALKERVDETLRLLSLENLAEKSPFALSGGQ
QRLVAIAGILACKPRVLVLDEPTAGLDFEAALRIREILGTLHNQGVTIILITHNLQEAED
LGARLVTLKANNKASNTAKNTENNKNKESSAKAKTTSLLKSFDPRATLLSCFILMLSAFS
ITNYIQLAILAFVTFTLTVAAKIPFVKLIASLHMIIAVFVFSGLLNILAVRTGTVLANIA
TIPITTDGINYAILFATRFSLVIIIGAILVLTMSQTTLNESCTRLLSPLRHIGIPTQEIA
LIMSLALRFLPTLSAEAHSVALAQIARGSSIRDGSFKQRVHAITALIVPGFAGVIRHADT
LALALDARCYTPGAERTHLHSWKMRIKDVLLSVVTLGVVSAIIVCKMLPL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagctaaaaagcacatgattgaaaacaatgcgcaagtagtgttgcgaaatatt
tgctatagctacgatgatggaaaaacttggacgcttaataatttaagtcttacaattaac
gctggcgagcgcttggcaattgtaggattaaacggttctggtaagtcaaccttggcaaaa
attattgcaggtttaacggcaccagatagcggttacgttacattgtgcggcgaaaaagtt
tttgaaaatactactgcttgtgctgaatcatataaaaatgcgcgaaaatatattggcgca
cttttccaaagtcctgaagatcagattattacaacaattactgaagaagatgttgctttt
ggactagaaaatttgcaattccctcaaaaagcaatgtataagcgcatcagtgaagcttta
aaaactgttcatatggaagataaacgttacgctgaccctagcactatgagcggcggacag
cagcaacgagtagctttagcaagtgctattgctatgaattctaaactgcttgttcttgac
gaacctacttctatgctcgactcgttcgcacgcaaagacgttgatgctttatttgataat
ttgcacaaaaatggcactactatcgttcaaattacacacaattttgaggaatgcaaacgc
gcaaatcgcatacttttactagaaaatggcatcctgaaagaagtaagctttaatggttta
aaaacttacttttctaatattgagttggcgaataatcatttaactaaaattagcgagagt
aaaaacttaacagatagtagacgcaaagaaaatgagtcagatatcgctgtagaaatttcc
ggactaactgttcaatatgataaaacttcaccagccgttattgacgattattcactaact
gttaaaaacggcgaaacagttgcaataatgggcgaaaacggctgcggtaaatcaactctt
gctaaaacaatgtgtggactgttaaaagccaattcaggaaacataacagtacatggcata
tctgttagaggtaaaacatctaaaataatacgacaaaaactacatcaaacaattggctac
gttatgcaactgccagaacaacagctttttgctgatacagtacggaacgatgtcgcttat
ggaccaaaaaattttgggctgaaaggcaatgctcttaaagaacgtgtggatgaaacccta
cgcttattgagccttgagaatttggctgaaaaatcaccttttgcgctttctggaggtcag
cagcgtcttgttgcaatagctggcattttagcttgcaagccacgcgtgctcgtactggat
gagccaacagctggattagattttgaagctgcgttacgtattcgagaaattcttggaacg
ctacacaatcaaggcgtaaccataatacttattacgcataatcttcaagaagcagaagat
ttaggcgcaagattagtaacattaaaagcaaataataaagcaagcaacacagcaaaaaat
actgaaaataacaaaaacaaagaaagttccgcaaaagcaaaaacaacttcgctacttaaa
tcttttgacccacgcgcgacgctgctatcatgctttattcttatgctaagtgcttttagt
attactaactacatacagttagctattcttgcttttgtaacatttactctaactgttgct
gcaaaaataccatttgttaagcttattgcttcactgcacatgattattgcggtatttgtt
ttctccggattacttaacattctggcagtgcgaaccggcacagtgctagcaaatattgca
actattcctattacaactgatggaattaattacgcaatactttttgcaacacgattctcg
cttgttattatcattggagcaattctagtactaacaatgagtcagacaacgcttaacgaa
tcttgcacacgattactatcaccacttcgacatattggaataccaacgcaagaaatagca
cttattatgagcctagcgctacggttcttaccaacactcagtgcagaagcgcactctgtg
gcactagcgcaaatcgctcgaggaagtagcattcgagatggttcttttaagcaacgagta
cacgctataacagctttaatagtgccaggttttgcaggagtaattcgccatgctgacact
cttgcgctcgcattagatgcacgctgttacacgcctggagctgaaagaactcacttgcac
tcatggaaaatgcgtataaaagatgtgctgctatcagtagttactcttggtgttgtaagc
gcgattattgtgtgcaaaatgctacctttgtaa
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