KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0826
Entry
HMPREF0424_0826   CDS       T01146                                 
Name
(GenBank) recombination factor protein RarA
  KO
K07478  putative ATPase
Organism
gva  Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:gva00001]
 09190 Not Included in Pathway or Brite
  09192 Unclassified: genetic information processing
   99976 Replication and repair
    HMPREF0424_0826
SSDB
Motif
Pfam: MgsA_C AAA_assoc_2 AAA RuvB_N Sigma54_activat AAA_16 AAA_5 AAA_14 Sigma54_activ_2 AAA_22 nSTAND3 Mg_chelatase AAA_3 AAA_28 IstB_IS21 ABC_tran AAA_18 AAA_30 AAA_25 Resolvase AAA_2 AAA_24 RNA_helicase Sterol_MT_C AAA_33 NB-ARC AAA_17
Other DBs
NCBI-ProteinID: ADB13746
LinkDB
Position
complement(934897..936285)
AA seq 462 aa
MEQDLFAASSAPSNVTRPLAVRMRPSSIEDVLGQSHALKEGSPLRRLANPQSKGSLTAPS
SVVLFGPPGVGKTTLAYIVARQSGRVFEELSAVTSGVKDVRAVLDRAHERLVSNGQETVL
FIDEVHRFSKSQQDALLPSVENRDVTFIGATTENPSFSIIKPLLSRSVVVKLASLSVEDL
HTLIERALTSENGLNNQLKIDDDAIDSIIRLSGGDARKTLTILEAAAGAVTGDVALQHGK
KKPVITDDIVSNVMDTTTVRYDKDGDDHYDVISAFIKSMRGSDVDASLHYLARMLRAGED
PRFIARRIMIAAAEEVGMAAPQILQVTVAAAQAVALIGMPEARIILSEAVIAVATAPKSN
ASYNAINKALQDVDAGNIGQVPLHLRNAPTALMKSWGNHDGYKYAHDYPGAVASQQYMPD
ELVGREYYQPSNRGYEHELTQRLSQIRAILHNSENKNNKTNS
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggagcaggatttatttgcagcaagcagcgcgccgagtaatgtaactcgtccgttggca
gtgcgtatgcgcccgagcagtattgaagacgtgctagggcagtcgcatgctctaaaagaa
ggttcgcctttgcgtaggcttgcaaatccgcaatctaaaggttctcttactgctccaagt
tctgttgtgttgtttggtcctccgggagtcggtaagactacgctcgcttatattgttgct
cgtcagtctggtcgagtgtttgaagagctttctgctgtaacgtccggagttaaagacgtt
cgtgcggtacttgatcgcgcgcatgagcgtttagtgagtaatggtcaagaaacagtttta
tttattgacgaagttcaccgtttttctaaatctcagcaggatgctttgcttccaagcgtt
gaaaatcgcgacgtaacttttattggtgctactaccgaaaacccgagcttttcaatcatt
aagccgttacttagcagatcagtagttgttaaacttgcgtcgcttagcgttgaagatttg
catacgcttattgaacgtgcgctaactagcgaaaacggtcttaataatcagcttaaaatc
gacgatgacgcaatagattctattattcgcttaagcgggggggacgctcgcaaaactctc
actattttagaggcggctgcaggggcagtaacaggagatgttgcgttgcagcatggcaaa
aagaagcctgtaattactgatgatattgtttctaacgtaatggatactactacagttcgt
tacgacaaagatggcgacgatcattacgatgtgatttctgcttttattaagtcgatgcgc
ggaagtgatgttgacgcttctttgcattacttagcgcgaatgcttagagctggtgaagat
ccgcgttttattgcaaggcgaattatgattgctgctgcagaagaagttggtatggcagct
ccgcaaattttgcaagtaactgttgctgcagctcaagctgttgctttaatcggaatgccg
gaagcgcgcattattctttctgaagctgtgattgctgtagcaactgctcctaaatcaaac
gcaagctataacgctattaataaggctttgcaagacgttgatgctggaaatattggtcaa
gtgcctcttcatttacgcaacgccccgactgctttgatgaaaagttggggaaaccatgac
gggtacaagtatgctcacgattatccgggtgctgtggcatcgcaacagtatatgccagat
gagctagttggtcgcgaatactatcagccgtcgaatcgtggctacgagcatgagcttact
caacgcttatctcaaatccgtgccattcttcacaattctgaaaataaaaataataaaact
aattcgtaa

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