Gardnerella vaginalis 409-05: HMPREF0424_0837
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Entry
HMPREF0424_0837 CDS
T01146
Symbol
ruvA
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF0424_0837 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gva03400
]
HMPREF0424_0837 (ruvA)
DNA repair and recombination proteins [BR:
gva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF0424_0837 (ruvA)
RecFOR pathway proteins
HMPREF0424_0837 (ruvA)
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
LcnD_C
Motif
Other DBs
NCBI-ProteinID:
ADB13881
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Position
complement(949061..949690)
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AA seq
209 aa
AA seq
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MIGMLVGQVASIDARSALIVVSGVGYETYMPSQDLSSLHEGQEVRVYTSLQVSQDALTLY
GFTTQAAKRMFLQVQKVSGIGPKVALSMLSTLNVDCLLQAISEGDVTSLSSAPGLGKKGA
QKIILELKGSLDSSILADSSNDSTQSNKQIVDSSVQCVIEGLVSLGWRQVDAQRAVEQVC
ADNNISTPISDADLPNVLRMALASLDRGR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgattggaatgcttgttggacaagttgcgtcaattgatgctcgttctgctcttattgtt
gtttctggagttggctatgagacttatatgccttctcaagatttgtcttctttgcatgaa
ggccaggaagttcgcgtttatacgtcgcttcaagtttcgcaagatgctttaactctttat
ggttttacaactcaagctgctaaacgaatgtttttgcaagtgcaaaaagttagtggaatt
ggtcctaaagttgctctttctatgctttcaactttgaatgttgattgtcttttacaagct
atttctgagggagatgtaacttctctttcttctgctcctggtttagggaaaaagggtgcg
cagaagattattttggaattgaagggttctcttgattcttcaatactggcagatagttct
aatgattctactcaatctaataagcagattgttgattctagcgtgcaatgcgtaatagag
ggtcttgtttcattgggttggagacaagttgacgctcaaagagcagttgagcaagtttgt
gcagataataatatttctactcctatatctgatgcagatttgcctaatgttttacgaatg
gcattagcttcacttgataggggtaggtaa
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