Gardnerella vaginalis 409-05: HMPREF0424_0873
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Entry
HMPREF0424_0873 CDS
T01146
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K18231
macrolide transport system ATP-binding/permease protein
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0424_0873
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gva02000
]
HMPREF0424_0873
01504 Antimicrobial resistance genes [BR:
gva01504
]
HMPREF0424_0873
Transporters [BR:
gva02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
HMPREF0424_0873
Antimicrobial resistance genes [BR:
gva01504
]
Gene variants
Macrolide resistance genes
Transporters
HMPREF0424_0873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
AAA_29
AAA_22
AAA_28
MMR_HSR1
SMC_N
NACHT
RsgA_GTPase
nSTAND3
AAA_16
NB-ARC
AAA_14
NTPase_1
TsaE
ATP-synt_ab
AAA_19
MobB
AAA_33
MeaB
AAA_24
Methylase_S
Motif
Other DBs
NCBI-ProteinID:
ADB13601
LinkDB
All DBs
Position
988641..990104
Genome browser
AA seq
487 aa
AA seq
DB search
MELILKAKDIRVEFKGRDVLDINELEVYDYDRIGLVGANGAGKSTLLRVLLGELTPPGCK
MNRLGELAYIPQLDEVTLQEEKDFALVGKLGVEQLNIQTMSGGEETRLKIAQALSAQVHG
ILADEPTSHLDREGIDFLIGQLKYFTGALLVISHDRYFLDEIVDKIWELKDGKITEYWGN
YSDYLRQKEEERKSQAAEYEQFIAERARLERAAEEKRKQARKIEQKAKGSSKKKSTEDGG
RLAHQKSIGSKEKKMYNAAKTLEHRIAALGKVEAPEGIRRIRFRQSKALELHNPYPIVGA
EINKVFGDKALFENASFQIPLGAKVALTGGNGIGKTTLIQMILNHEEGISISPKAKIGYF
AQNGYKYNSNQNVMEFMQKDCDYNISEIRSVLASMGFKQNDIGKSLSVLSGGEIIKLLLA
KMLMGRYNILIMDEPSNFLDIPSLEALEILMKEYTGTIVFITHDKRLLENVADVVYEIRD
KKINLKH
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaattaatattaaaagcaaaagacattcgtgtggaattcaaaggacgcgatgtttta
gatataaatgaattagaagtatatgattatgaccgtattggtttagtaggagcaaatggt
gctggaaaaagcactttactcagggtacttttaggagaattaactcccccaggatgtaaa
atgaatcgtctgggtgaacttgcctatattccccagttggacgaagtaactctgcaggag
gaaaaagattttgcacttgtaggcaagctaggtgttgagcaattaaatatacagactatg
agcggtggtgaagaaacaaggcttaaaatagcacaggccttatcggcacaggttcatggt
attttagcggatgaacctacgagccatttagaccgtgaaggaattgattttctaatagga
cagctaaaatattttacaggtgcactgttagttattagccatgaccgctattttcttgat
gaaatagtagataaaatatgggaactgaaagatggcaaaatcactgagtattggggaaac
tattctgattatcttcgtcagaaagaggaagaacgtaagagccaagctgcagaatacgaa
caatttattgcggaacgtgcccgattggaaagggctgcggaggaaaagcgaaaacaggct
cgtaaaatagaacagaaggcaaaaggttcttcaaagaaaaaaagtactgaagacggaggg
cgtttagctcatcaaaaatcaataggaagtaaggaaaaaaagatgtataatgctgctaaa
accctagagcacaggattgcggccttaggaaaagtagaagctccggaaggcattcgcaga
attcgtttcaggcaaagtaaagcattggagctccataatccataccctatagtcggtgca
gaaattaataaagtatttggggataaggctctgtttgaaaatgcatcttttcaaattccg
ttaggagcaaaagtggcgttaactggtggtaatggaatcggaaaaacaactttaatccaa
atgatcttaaaccatgaagaaggaatttctatttcgcctaaggcaaaaataggttacttt
gcacagaatggttacaagtacaacagtaatcagaatgttatggagtttatgcagaaggat
tgtgactacaatatatcagaaattcgttcagtgctagcatctatggggttcaaacagaac
gatattggaaaaagtttatctgttttaagcggtggagaaattataaaattgttgcttgct
aaaatgctcatgggtagatataacatcctaataatggatgaacccagtaacttccttgac
ataccaagtttagaggctttggaaatactaatgaaggagtacaccggaactatcgtgttt
atcacccacgataaacgattactcgaaaatgtagcagatgtagtttatgaaattagagat
aagaaaataaatctgaaacattaa
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