Gardnerella vaginalis 409-05: HMPREF0424_0876
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Entry
HMPREF0424_0876 CDS
T01146
Name
(GenBank) resolvase, N-terminal domain protein
KO
K06400
site-specific DNA recombinase
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
HMPREF0424_0876
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GFIT
Motif
Pfam:
Recombinase
Resolvase
DUF4368
Zn_ribbon_recom
crAss001_48
HMMR_N
Zn_ribbon_RPB9
DUF4407
DUF2935
Motif
Other DBs
NCBI-ProteinID:
ADB14159
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Position
994984..996636
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AA seq
550 aa
AA seq
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MNKLNRQPSYTLDNVGKITALYCRLSKDDELQGDSNSIINQKSMLKKYAEDNHFNNLMFF
VDDGYSGTNFQRPDWLKLTALIDEGKIGTIIVKDMSRLGRDYLQVGMYTEMVFPNADIRF
IAINNGVDSNNQSDNDMTPFINIFNEFYAKDTSRKIKAVFKAKGQSGKPLCINPPYGYLK
DPEDKNHWIVDEEAASVVREIFRLCVNGYGPSQIANELIKRNIPTPSEHFFSLGIKIPSA
KSEIKGVWNQKTISNMLEKQEYLGHTVNFKTRKKSYKCKKTLLNPKEDWLIFKNTHEAII
DQETFDIVQRIRNGRRVRTNLGEMPVLSGMLFCADCGNKLYQVRGKGWSHDKEYFVCATY
RKQKGKCSSHQIRNIQIEAILLHELRMITSFAKQHEEEFVGLVMKKSEKELTQKLKSSNR
ELEQAKARISKLDTIVQHLYEDNLDGKISDERFKSMSESYDKEQAELKSKIESLEAFISK
AQEECLNVDSFLKLVRQYTDIQELNAEIIRTFVDKIYVEKSEKVAGTRTKKQTIWIQWNY
IGAVDIPLHK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactaaatagacagccttcttatactctagataatgtaggcaagataacggca
ctttactgccgtttatccaaagacgatgaattacaaggtgacagcaattccattatcaat
caaaagagcatgctgaaaaagtatgccgaggataatcatttcaacaatcttatgttcttt
gtagacgatggctactcgggtactaatttccagcgacctgattggcttaaattaactgct
ctcattgacgaaggaaagattggaaccattatcgtcaaggacatgtcacgcttgggtaga
gattatctgcaagttggtatgtatacagagatggtattccctaacgctgatattcgcttt
attgcaataaataacggcgtagatagcaataatcagtcagacaacgacatgacacctttc
atcaacatcttcaatgagttttatgctaaagacacaagcagaaaaataaaagctgtgttt
aaagcaaaaggacaaagtgggaagccgctctgcatcaatcctccttacggatatcttaag
gatcctgaagataaaaatcattggattgtagatgaagaagctgccagtgtagtgcgtgaa
atctttagactctgcgttaatgggtatgggcctagccagattgccaatgagctaatcaaa
aggaatattccaacaccttctgagcattttttctctcttggtattaaaattccttccgcg
aaatcggagattaagggagtctggaatcaaaaaactatctctaatatgcttgaaaagcaa
gaatatcttgggcatacggtcaatttcaaaacaagaaagaaatcgtacaagtgcaagaaa
acattattgaatcccaaagaagactggctaattttcaaaaacacacacgaagcaattatt
gaccaggaaacttttgatattgttcaacgtataagaaatggtagacgagtgcgtaccaat
cttggagagatgccggtgttatcgggaatgctattttgtgcggattgtggtaacaagctt
tatcaggttcgaggaaaaggttggagccatgataaagaatactttgtctgtgctacatat
cgtaagcaaaaaggcaaatgctcatcacatcaaattagaaatattcagatcgaagcaata
ctgcttcacgagctacgaatgattacttcatttgccaaacagcacgaagaagagttcgtg
ggacttgtgatgaagaaaagcgagaaagaactaacccaaaagttaaagtcctctaatagg
gaactcgagcaagcaaaagcaagaattagcaaacttgacacaattgttcagcatctctat
gaagacaacttagacggtaaaatttctgatgaacgatttaagagcatgtctgagtcctac
gacaaggaacaagctgaactgaaaagcaagattgaatcccttgaagcctttatttctaaa
gcgcaagaggaatgtctcaacgtggattctttcttgaaattagtacgacaatacacagat
atacaagaacttaatgcagagatcattcgaacctttgtagataagatttatgttgaaaaa
tctgaaaaggtagcaggtacaagaaccaagaaacaaaccatatggatacagtggaattac
ataggtgcagttgatattccactccataagtaa
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