Gardnerella vaginalis 409-05: HMPREF0424_0910
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Entry
HMPREF0424_0910 CDS
T01146
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gva03019
]
HMPREF0424_0910
Messenger RNA biogenesis [BR:
gva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HMPREF0424_0910
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
CoaE
Motif
Other DBs
NCBI-ProteinID:
ADB13534
LinkDB
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Position
complement(1039156..1040115)
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AA seq
319 aa
AA seq
DB search
MSDNTQHTTQSDVQRDAQHTTQRSASTSMQLSDRFEVMLITGMSGAGRSHAANALEDMGW
YVIDNLPPKLLIPLVDMMTSSGSKVHKLAAVIDVRSRGYFDDLFAVLAHIDDLGVKTRIL
FLDASDAVLIKRYESVRRPHPLQRGGRLIDGILEERELLSHLKDCANIIIDTSALSIHQL
STKLYEGLLGKGSSTVSVHIFSFGFKYGMPMDADFVADMRFLPNPFWVPELRELTGKDQA
VQDYVLSNSAAITFLDSYENALLTAIDGFAKEDKHYVTIAVGCTGGQHRSVAVSIELARR
LRLHGLQVTVSARELQRRS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatacgcaacatactacgcaaagtgatgtgcaacgtgatgcgcaacatact
acgcaacgttccgcgtcgactagtatgcaactatctgacagatttgaagttatgctaatt
acaggcatgagcggagctgggcgctcgcacgctgctaacgcgttggaagatatgggatgg
tatgttatcgataatcttccgccaaaactgctcataccgctagtagatatgatgacttca
tccggttctaaagtgcataagcttgctgctgttattgacgtgcgttctagaggatatttc
gacgacctgtttgcagttcttgcgcatattgatgaccttggtgtaaaaacgcgaattctg
tttctagatgcttcagatgctgtgcttatcaagcgttacgagtctgtgcgtagaccgcat
cctttgcagcgcggtggcagacttattgacggtattctagaagagcgagagctgctcagt
catctgaaagattgcgcaaatattattatcgatacttctgcacttagtattcaccaactt
tctacaaagctttacgaaggattgcttggaaaaggctcttctactgtttctgtgcatatt
ttcagctttggatttaaatacggcatgccaatggacgctgattttgttgccgatatgcga
tttttgccgaatcctttctgggttcctgaattaagggagcttacaggtaaggatcaagct
gtgcaagattatgttttatcgaattctgcggcaattacattcttagattcttacgaaaat
gcgcttcttacagctatcgacggattcgctaaagaagacaagcattacgtgactattgct
gtaggatgtactggcggtcagcatcgttctgttgccgtaagtattgagcttgctagacgt
ttgagattgcacggtttgcaagttacagtatctgcaagagagctacagagaagatcatag
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