Gardnerella vaginalis 409-05: HMPREF0424_0925
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Entry
HMPREF0424_0925 CDS
T01146
Symbol
pyrF
Name
(GenBank) orotidine 5'-phosphate decarboxylase
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00240
Pyrimidine metabolism
gva01100
Metabolic pathways
gva01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HMPREF0424_0925 (pyrF)
Enzymes [BR:
gva01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
HMPREF0424_0925 (pyrF)
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GFIT
Motif
Pfam:
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
ADB14007
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All DBs
Position
complement(1056304..1057347)
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AA seq
347 aa
AA seq
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MDELIEAIAAKQNPSVVGLDPKPGIVPAEIISSLADEVLQEVEGEDALPTLLATAYFEFN
RAIIDAVADFVPAVKPQIAMYEALGSAGMDTYAMTCEYAKSQGLVVIGDAKRGDIGSTAG
QYAAHLSGFANLSSYFEDENATGNALPQSLKNLLKSSKNLDVWHEDSLTVNPYMGSDGVK
PFIDEAVAHDKSIFVLLRTSNPSSKELQELILQDGKPVYEHMADLIENWGASSIGKHGYS
RVGAVVGATHPQEGKHLREIMPHTFFLVPGYGAQGGTAQDVAGMFDANSEGAIVNSSRGI
IGAWKKSEDYAKNQGHMSLDDILDIVRDSAAVAAKNMRDDLRNAVYR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacttattgaagcgattgcagccaagcaaaatcctagtgttgtgggcttggac
cctaagccaggtattgtaccagccgaaattattagctctcttgcggacgaagttttgcaa
gaagtagaaggcgaggatgcgctgccaacgcttttagctacagcttattttgagtttaat
cgcgctattatcgacgcggttgcagattttgtgccggctgtaaagccgcaaattgcgatg
tacgaagcactaggttccgctggaatggacacgtacgcaatgacttgcgaatacgcaaaa
tcgcaaggattagttgtaataggtgacgcaaagcgcggagatattggctctacagctggt
cagtatgctgctcatttaagcggtttcgctaatctttcttcatattttgaagacgaaaat
gctactggtaacgcgcttcctcaatctcttaaaaatcttctaaaaagctctaaaaatctt
gacgtttggcatgaagattcgcttacagtaaacccttatatgggttcggatggcgtgaag
ccttttatcgatgaagcggtagcgcacgataaaagcatttttgtgctgcttcgcacttcg
aatccttctagcaaagagctgcaggagcttattttgcaagatggcaagccagtgtatgag
catatggctgatttgattgagaactggggtgcttcaagcattggtaagcacggttattca
agagttggtgcagttgtaggtgccacgcatccgcaggagggcaaacatttgcgcgagatt
atgccgcacactttcttcttggttccaggctatggtgctcaaggcggtactgctcaagat
gttgctggaatgtttgatgcaaattctgaaggtgctattgtcaattcttcgcgcggtatt
attggtgcttggaaaaagtctgaagattacgctaaaaatcaagggcacatgtctctcgat
gacattcttgatattgtgcgtgattctgcagctgttgctgcgaaaaatatgcgtgacgac
ttgagaaatgcagtgtatcgctag
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