Gardnerella vaginalis 409-05: HMPREF0424_1052
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Entry
HMPREF0424_1052 CDS
T01146
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00470
D-Amino acid metabolism
gva01100
Metabolic pathways
gva01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF0424_1052 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HMPREF0424_1052 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gva01011
]
HMPREF0424_1052 (alr)
Enzymes [BR:
gva01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HMPREF0424_1052 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
gva01011
]
Precursor biosynthesis
Racemase
HMPREF0424_1052 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ADB13980
LinkDB
All DBs
Position
complement(1198105..1199484)
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AA seq
459 aa
AA seq
DB search
MSTDLSNAASNSASNAAMLEANYARALSAYPGQVIVDLKALRDNMRTLVARVSQDLQPGQ
NAPEVMGVVKAGGYGHGLIPSALAALAGGATWLGTAQPYEALRLRAVGIDSSRCHILTWL
TSAPTTRFADLITADIDISVGSIDSLDAVAFAARKLGKPARVHVKVDTGFGRNGFTPEGF
CAALEKLQQYSSEGVIEVIGQWSHLAVADSPDVPEFVDATDRQIQQFHEFTKRMKEASVA
PKIRHLANTAATLNRPEIRFELVRPGIGLYGYEPDPAMGNSQTYGLQPAMTLQAQLGTVK
TVEEGHGISYGRTYLTPNNTSTAIVPLGYADGILRSASGFDMQGARHVNKPGGPVRVETK
NGARIVNVSGRVCMDQFIVDLKGDASELGVLEGNTVTLFGPGRGLEFAEPTADDWAEAAG
TISYEIMTGIGPRVPRLYRNAYEVLSSSDIAKLDAKSLI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagatttaagtaatgcggcaagtaatagtgcaagtaatgcggcaatgttagaa
gcaaactatgctcgcgcgttaagtgcataccctgggcaggtaatcgtcgatttgaaggca
cttcgagacaatatgcgcactttggttgcgcgcgtttcgcaagatttgcagcctggtcag
aatgcgccggaagttatgggagtcgtaaaagcaggcggatacggccacgggcttattcct
agtgcgctcgcggctttagctggaggcgctacttggcttggcacagctcaaccgtacgag
gcgttacgtttgcgtgcagttggtattgattctagccgttgtcatattctcacttggctt
actagcgctccaactacgagatttgcagatttgattacagcagatatcgatatttctgta
ggctctattgactcgcttgatgctgtggcttttgctgcacgaaagttaggtaaacctgct
cgcgtgcacgtaaaagtcgatactggttttggacgaaacggttttacgccagaaggtttt
tgtgccgctctagaaaaattgcaacaatactctagtgaaggcgtaatcgaggttattggc
caatggagtcacttagctgtagcagattctcctgacgttccagaatttgtagatgcaacc
gaccgtcaaatccaacaattccacgagtttacgaaacgcatgaaagaagcatcggttgct
cctaaaatccgccatttagcgaatactgctgcaacgcttaaccgtcctgaaattcgtttt
gaacttgttcgtccaggaattggtttgtacggctacgagccggatcctgcaatgggaaat
tcccaaacctacggattgcagcctgctatgacgcttcaagcgcaacttggaactgtaaaa
actgtagaagaagggcatggaatttcctacggacgcacgtatttaactccaaataatacg
agtactgctattgtgcctcttggttacgctgacggcattttgcgatctgcttccggattc
gatatgcaaggtgcgcgtcatgttaataagccaggcggtccggttagagtagaaacaaag
aatggtgctcgaattgtgaacgtttctgggcgagtttgcatggatcagttcatagttgat
ttaaaaggcgatgcttcagagttaggtgttctggaaggcaatactgtaacgctttttggt
cctggaagaggcttggaatttgccgagcctactgcagacgattgggcagaagctgcagga
acaatcagctacgaaatcatgactggaattgggcctcgcgtgccgaggctttaccgcaac
gcttacgaagtgctatcttctagcgatattgcaaaactggacgcaaaaagtcttatataa
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