Gardnerella vaginalis 409-05: HMPREF0424_1127
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Entry
HMPREF0424_1127 CDS
T01146
Name
(GenBank) DEAD/DEAH box helicase
Organism
gva
Gardnerella vaginalis 409-05
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ADB13920
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Position
complement(1298997..1300820)
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AA seq
607 aa
AA seq
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MPHTHHAAFAQKRGAKNTKNVKNTRKSAEKRNPFEYQGSHKNYGSNHEFNSRRERNRKAE
KARQKAREKALRYEEVAIADAEQDFAKNNFAKHNIDKNNVVKNDIAKSHNTKQNSAISLR
PTSKKQNQDSHNATIIPDSAIESCENYRDDVTFAQLGVPEPLVEVLRADGKTTAFPIQQA
TLPDSLQGANILGRGRTGSGKTLAFSIPLVARLAENFVDLIHSDKNRKSRESSEIPAPRA
IILAPTRELVHQIDDVIAPLAAAYGMRTVTVYGGVRYQRQVSQLKQGAQIVLACPGRLED
LLRQGALTLEKVMVSVLDEADEMADMGFLPAVTRLLEQVAPDGQRMLLSATLDKQVSTLV
ERFLPNAVVHAVDDADCQVDTMTHHIFAVSAGDKYEVLRKLASGKKRSIFFTRTKYQAKN
MAKKFVQQGIPAVDLQGNLSQNQRDRHLAVFAEGLVRVLVATDVAARGIDISDVALVVQT
EPPEDPKSFLHRSGRTARAGEEGDVVTLVLPNQKRAAHMMLRKAGIHAKAEDVSPSSSVL
DEIVGEAAELQEGWSMPEPEQQKRKGRGRGRGGRGRVRGQRGERSERRWHGKRGERGSRV
HRFGREF
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcatactcatcatgctgcgttcgcccaaaagcgaggcgcgaagaataccaagaac
gtcaaaaatactaggaaatcagctgaaaaacgcaatccttttgaatatcagggtagtcat
aaaaattacggttctaatcacgagttcaattcgcgcagggagcgaaatcgcaaagcagaa
aaagctcgtcaaaaagcgcgcgaaaaagccttgcgctatgaagaagtagctattgcggat
gctgaacaagattttgctaaaaataattttgctaagcataatattgataaaaataatgtt
gttaaaaatgatattgcaaaatctcataatacaaaacaaaattctgcaatatctttgcgt
cctacttcaaaaaagcaaaatcaagattctcataacgcaacaattattccagactctgct
attgaatcttgtgaaaattaccgtgacgatgtcacttttgcgcaacttggagtcccagag
cccttggtagaagtgttgcgtgctgatgggaaaactactgcattcccaattcagcaagca
acgcttcctgattcattacaaggtgcgaatattctagggcgaggtcgcacaggaagtggt
aaaacattagcattttctattccacttgttgcgcgtttagctgagaattttgttgattta
attcattctgataaaaaccgtaagtcacgcgagtctagtgaaattcctgctcctagagca
ataattcttgctccaactcgcgagcttgtgcatcaaattgatgacgtaatagcgccgctt
gctgcagcttatggcatgcgtactgtgacagtgtatggaggtgtgagataccagcgtcag
gtatcgcaacttaagcagggtgcgcagattgtgcttgcttgccctggtcgtttggaagat
ttgctgcgtcagggagcacttacgcttgaaaaagtgatggttagtgtgcttgatgaagca
gatgaaatggcggatatgggattccttcctgctgttactagacttcttgaacaagttgcg
ccagatggtcaacgcatgctgctttctgcaacgcttgataagcaagtttctacattggtt
gagcgtttccttccaaatgctgttgttcatgctgtggatgatgctgattgccaagttgac
actatgacgcatcatatttttgctgtgtctgcaggggataaatacgaagttttgcgaaag
cttgcttctggaaagaaacgttctatattctttacgcgcacgaaatatcaagcgaagaat
atggcgaaaaaatttgtgcagcaaggtattcctgcagttgatttgcaaggtaatttgtcg
cagaatcagcgagatcgtcatttggctgtgttcgctgaaggcttggtgcgcgtgctggtt
gctacggacgttgctgcgcgaggtattgatattagcgacgttgcattagttgtgcaaact
gagcctcctgaggatcctaagtctttcttgcatcgttcgggtcgcactgctcgagctggt
gaagaaggcgatgtcgtaacgcttgtgcttcctaatcagaagcgcgctgctcatatgatg
cttcgtaaggctggaattcatgcgaaagctgaggatgtgagtccttcttcatcggttcta
gatgagattgttggtgaagctgccgagcttcaagaaggctggagtatgccggagccggag
cagcagaagcgtaaaggtcgcggtcgtggacgcggtgggcgcgggcgcgtacgtgggcaa
cgtggtgagcgcagtgaacgtcgttggcacggtaaacgtggcgaacgcggtagtcgtgtt
catcgcttcggtcgtgagttttag
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