Gardnerella vaginalis 409-05: HMPREF0424_1222
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Entry
HMPREF0424_1222 CDS
T01146
Symbol
cgtA
Name
(GenBank) Obg family GTPase CgtA
KO
K03979
GTPase [EC:3.6.5.-]
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gva03009
]
HMPREF0424_1222 (cgtA)
Ribosome biogenesis [BR:
gva03009
]
Eukaryotic type
Other ribosome biogenesis factors
HMPREF0424_1222 (cgtA)
Prokaryotic type
GTPases
HMPREF0424_1222 (cgtA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP1_OBG
DUF1967
MMR_HSR1
FeoB_N
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ADB14435
LinkDB
All DBs
Position
complement(1451512..1453194)
Genome browser
AA seq
560 aa
AA seq
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MSDFVDRVTVHVKGGDGGNGSAGVRREKYKPLAGPNGGNGGDGGSVIFVADRNANSLLDY
RFMPHRTAENGTMGLGDTKDGSKGADLVLPVPVGTVVFTARGVAGSQKRPGEVLADLQHV
GDKFVVAQGGAGGLGNAALANKTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAG
KSSLVASISAAKPKIADYPFTTLVPNLGVVSFGNYRYTIADVPGLIPGASEGKGLGLEFL
RHIERTEIIAHVIDCATLEPNRDPISDYHALEHELAQYADKLELPLGAIPIPERPRIIVL
NKVDVPEAKELADFVRGEFEKMGLTVFEISTASHEGLKELGFALGRLVEKMREKLAAEEA
AREEERVVIQPLEQQTSALRRRRDDGRGNSADFEIKREEDRNGDFWFTVTGAKPERWVIQ
TNFDNDEAVGYLADRLAKLGVEDELRKKGARPGDEIRIGTGNHMVCFDWDPSIAAGAEGL
DGANLGARGKDLRIEANDPRGARRTNAERRRDYHSMMDAKSAVRDAMMAERKSGHWADPS
VDDDRHDENSLFGRGEEQKN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattttgtagaccgcgtaacagtgcatgtaaaaggcggagatggtggaaacgga
tctgccggagttcgtcgcgaaaagtacaagccattagcgggtccaaatggcggtaatggc
ggtgacggtggttccgttatttttgtagctgatcgtaacgcaaacagcttacttgactac
cgcttcatgcctcaccgcactgcagaaaacggtacgatgggcttaggtgacactaaagac
ggttcaaaaggtgcagacttagtgcttccggtgcctgttggaactgttgtttttacagca
cgcggtgtcgcaggctctcaaaagcgacctggcgaagttttggcggatttgcaacatgtt
ggagacaaattcgttgtggcgcaggggggtgccggcggtcttggcaacgcagcactcgca
aacaaaactcgtcgtgccccaggattcgcgcttttaggcgagcctggcgaagaacgcgat
gtaattttggaactcaagtctatcgcagacgtagctttagttggattcccttctgcagga
aaatcaagcttagttgcttcaattagtgcagctaagccgaaaattgctgactatccgttt
actactttggtgccaaacctaggtgttgtaagcttcggcaactatcgctacacaattgca
gacgttccaggcttaattccaggagcttccgaaggaaaaggcttaggtcttgagtttttg
cgtcatattgagcgcacagaaattattgcgcatgtaatcgattgcgcaacgctggagcca
aatcgcgatccaattagcgattaccacgctcttgagcatgagcttgcgcaatacgctgat
aagcttgagcttccgttgggtgcaatcccaattccagagcgtccgcgcattattgtgcta
aataaagtcgatgtgcctgaagctaaagaattggctgattttgtacgcggtgaatttgag
aaaatgggattgactgtatttgagatttctaccgcgtctcacgaaggcttgaaagagctc
ggttttgcgcttggacgattggttgaaaagatgcgcgagaagctcgctgccgaggaagca
gcacgagaagaagagcgtgttgtcatccagcctcttgagcagcagacttcagctttgcgt
cgtcgccgcgatgatggacgtggaaatagtgcagactttgaaattaagcgcgaggaagac
agaaatggtgatttttggttcactgttactggcgcaaaacctgagcgctgggttatacaa
acgaatttcgacaacgacgaagccgttggttatttggcggatcgcttggcaaagcttggc
gttgaggatgaattgcgcaagaagggcgcgcgtccaggagacgaaattcgtattggcact
gggaatcatatggtttgcttcgactgggatccaagtatcgctgccggtgcagaaggattg
gacggcgctaacttgggtgcgcgtggcaaggatttgcgaatcgaagcgaacgatcctcgc
ggagcaaggcgcacgaatgctgagcgtagacgagattatcacagcatgatggatgcaaag
agcgcagttcgagacgcgatgatggctgagcgaaagtcgggtcactgggcggatccttct
gtggatgacgatcgccatgatgaaaatagtttgtttggtcgtggagaagagcagaaaaac
tag
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