Gardnerella vaginalis 409-05: HMPREF0424_1259
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Entry
HMPREF0424_1259 CDS
T01146
Name
(GenBank) S-adenosylmethionine-dependent methyltransferase, YraL family
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gva03009
]
HMPREF0424_1259
Enzymes [BR:
gva01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
HMPREF0424_1259
Ribosome biogenesis [BR:
gva03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HMPREF0424_1259
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
ADB14432
LinkDB
All DBs
Position
complement(1505338..1506240)
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AA seq
300 aa
AA seq
DB search
MCNEEDSLGKVVLAATPIGNMADASARLINLLETADIVAAEDTRRLYDLANRLGVHVSGS
VIAYHDHNERNKADGLLDKVEQGSTVLVVSDAGMPTINDPGLAVVRRAIERDLPVTCAPG
PSAVLDALALSGLPTDRFCYEGFLPRKSGERQQHLRSLKAERRTIVFYEAPHRIAEAMED
ILAVLGSNRPMALCRELTKDFEEIRRGTVQSIHDGVLADPPRGEIVLVIGGASDEEVQSE
STDLSIDALAKLSLECAESEGLRIKEAITKVVKEHPFADGSFANRKQVYASCLEHKPNQK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaacgaagaagatagtttaggtaaagttgttttagctgctacgcctattgggaat
atggcagacgcttctgcacgattaattaatcttcttgaaactgctgatattgttgctgct
gaagacacgcgtaggctttatgatttagcgaatcgccttggtgtgcatgtttctggtagc
gtaatcgcataccacgatcataatgagcgaaataaggcagatggcttgctagacaaagtt
gagcagggtagcactgttcttgttgtttcagacgcaggtatgcctaccattaacgacccg
ggtcttgctgttgttcgacgtgcaatagagcgagatttgcctgttacttgcgcgcctggt
cctagtgcagttttagatgcgcttgctctttctggattgccaaccgatcgcttctgttat
gaaggctttttgcctcgtaaatctggtgagcgtcaacagcatttgcgctcacttaaagcc
gagcgacgaacaatagtattttatgaggctccacatcgtattgcagaagcaatggaagac
atattggcagtacttggttctaatcgtccaatggcgttatgccgtgaacttacaaaagat
tttgaggaaattcgtcgtggaactgtgcaaagtattcacgatggtgttttagcggatcct
cctcgaggtgaaatagttttagttatcggtggtgcaagtgacgaagaagtacagtctgaa
agcacagatttaagcattgatgctcttgcaaagctttcgcttgaatgtgcagaatccgaa
ggtttgcgcataaaagaagcaattacaaaagtagtaaaagagcatccgtttgctgacgga
tcttttgctaatcgtaagcaagtttatgcgtcttgtcttgagcataaacctaatcagaaa
taa
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