Gardnerella vaginalis 409-05: HMPREF0424_1261
Help
Entry
HMPREF0424_1261 CDS
T01146
Name
(GenBank) putative formate--tetrahydrofolate ligase
KO
K01938
formate--tetrahydrofolate ligase [EC:
6.3.4.3
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00670
One carbon pool by folate
gva00720
Other carbon fixation pathways
gva01100
Metabolic pathways
gva01120
Microbial metabolism in diverse environments
gva01200
Carbon metabolism
gva01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
HMPREF0424_1261
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HMPREF0424_1261
Enzymes [BR:
gva01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.3 formate---tetrahydrofolate ligase
HMPREF0424_1261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FTHFS
CbiA
DUF1611
LpxK
Motif
Other DBs
NCBI-ProteinID:
ADB14561
LinkDB
All DBs
Position
complement(1507387..1508904)
Genome browser
AA seq
505 aa
AA seq
DB search
MSILDSYTTTFGLVKKIDAFGYLDYLKQYPEEPRKRGKVLLVTADTPLKASRGEGKTTTT
IALVDALRERGVDAAAVLRQPSMGITAAGSKGGASGGGKSSLSHPELIDWGLCGEMAAIA
CAQNLLVSFAEKAVDEGALDTILVPRVSEVPSRSLRSIAVDFGKGTVPERVVLTPTCELM
QIVVLSRSMDEISHRVSSMIAGTKDGKPVQFGEFVDLWRITNILADAVKPAKTETINGSP
IYVHCGPFANVSLGIPSLVSVEMACAEHDVVVVEAGYGTDAGAQKWLDIAAREFGAKWPA
AAVVVTRATTWRDDETLAWRYPFHVSRLEFLNIPTFPLINLWEGEDNQVPELLEQAKSLG
FRKPIVGNLFRDGGDGLANQLDDFVSAITDDVETKVPESRRGKTLRERINLLCAEAYGVP
TERVIDKAGFADSLKEAQNLCANSGVVFDDLALVAVKSPATMTDDDHAPEDSRTVTLKKV
EVHAGAGVVQVNLTSSLTTPMPKIV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcttgattcatacactacaacattcggtttggttaaaaaaattgatgccttt
gggtacctggattatttaaagcaatatccagaggagcctaggaagcgcggtaaagttctg
cttgttactgctgatactcctttaaaagcttctcgcggagaaggtaaaacaactacaact
atcgcgttagttgatgcattgcgtgagcgcggtgtggacgcagctgcagttcttcgtcag
ccaagcatgggaattacagctgctggttctaaaggtggtgcaagtggtggcggtaagtct
tcgctttctcaccctgagctaattgactggggcttgtgtggtgaaatggctgctattgct
tgcgcgcagaatttgcttgtgtcgtttgcggaaaaagcagtcgatgagggcgcccttgat
actattttggttcctcgagttagtgaagttccttcgcgatctttgcgaagcattgctgtt
gattttggcaaggggactgttcctgagcgcgtcgttttgacgccaacttgcgagcttatg
caaatcgtagtgttgtcgcgcagtatggacgagatttctcatcgtgtttcttcaatgatt
gctggcacaaaagacggtaagcctgttcagtttggcgagtttgtggatttgtggcgaatc
accaatattcttgccgacgctgtaaagcctgcaaaaactgagacgattaatggttctcca
atttacgttcattgtggcccgtttgcgaatgtttcgcttggtattccaagccttgtaagc
gttgaaatggcttgcgctgagcatgatgttgtggttgtagaagcaggttatggtacggat
gctggtgctcaaaagtggttagatattgctgctcgcgagtttggtgcaaagtggcctgct
gctgcagttgtagttactcgcgcaactacttggcgagatgacgaaactttggcttggcgt
tacccattccatgtttctcgtttggaatttcttaacatccctacgttcccgttgattaat
ttgtgggaaggtgaagataatcaagttcctgaattgttggaacaagctaagtctttagga
ttcagaaagccgattgttggcaatttattccgcgatggtggcgatggtttggcaaatcag
ctggacgattttgtgtctgcaataactgatgatgttgaaacgaaagttccagaaagtagg
cgtggaaagacgcttagggagcgaattaacttgctgtgcgcagaagcttacggtgttcct
actgagcgtgtgatcgataaagcaggttttgctgattcattgaaagaagcgcagaatttg
tgtgcaaattctggagttgttttcgatgacctcgcgcttgttgctgtaaagtcgccagca
actatgactgacgatgatcatgcacctgaagattctcgcactgtgacattgaagaaagtg
gaagttcacgctggagctggagttgtgcaagtaaatctcacatcttcactaactactcca
atgccaaaaatagtgtga
DBGET
integrated database retrieval system
