Gardnerella vaginalis 409-05: HMPREF0424_1288
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Entry
HMPREF0424_1288 CDS
T01146
Name
(GenBank) glycosyl hydrolase, family 31
Organism
gva
Gardnerella vaginalis 409-05
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_31_2nd
Glyco_hydro_31_3rd
DUF5110
Motif
Other DBs
NCBI-ProteinID:
ADB14157
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Position
complement(1536873..1539620)
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AA seq
915 aa
AA seq
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MSVVNMSKQDKSQIIGEAVAYSDSQSQIFADVANSQYAKAQDSQVIKGEKWRITVITDSL
IRLEWSDDGKFVDNPTQTVICRNFAQKSVDAQPQFSARTNENEWLEVETEKLHLTYNCEA
FSKEGLSIVVRGVPCTQFNTWHYGDACPGNLLGTFRTLDQANGPVKLGKGILSRDGWSIL
DDSATCEIAPAEEINGKPNPYGAWVKSRAQKVSEQSGRYKDLYFFGYGHRYIQAIQDFYK
LTGAQPLLPRFALSNWWSRYYRYRQDEYLQLHNRFKREGIPFSTAVIDMDWHVTDVDPKY
GSGWTGYTWNEELFPDHRAFLRKLNAAGLSPTLNLHPRDGVRAFEKDYPQVAQDAGIDPA
SGKAVEFDLTNPQFVKAYFNMHHRMEDEGVRFWWIDWQQGGVTREPGLDPLWMLNHMHYE
DAAREGRWPITFSRYAGPGSHRYPVGFSGDTVTTWDSLAFQTYFTSTASNIGYGWWSHDI
GGHMLGVRNNELEARWYAFGAFSPINRLHSTCSPFAGKEPWNFPQETREAMVKMLRLRAE
LLPYVYTMNYRAAFEGRPIIEPMYWQSPEVGMAYEIPNEYRFGSELIVAPIVSSNDAAAL
RGCAGVWLPEGDWYDLFDGRRYVSRCWNGRRFEAWRSLDRVPAFARAGAIVPLQVLPEVA
DCERSAEAAESVNSIENPRALRVLAFPGADGEFVMREDNGDFAAASAGNTANTRMNFVWR
DGNGSSQFIISGVAGCDAAVESVPQKRNWNVVFRGVACADFAHVRVFVGSRELNASEFAV
SYEGEEVTLSLSVSVKDVPARSEVRVIVDGGLQIAADPKVGDAYRFLLQAQVPYRGKEMA
FDAVRDSGGSASAIAEISTLEYENESEAEKYRNSVDMLNAYATDQPSVVKWAQWRCTLPV
SVKHALEEILLRSVE
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtagtaaatatgagcaagcaagataaatcacaaattatcggtgaagctgtggcg
tattcggattcgcaatctcaaatttttgctgacgttgcaaattcgcagtacgcaaaggcg
caggatagtcaggtaattaagggcgaaaagtggcgaattacggttattacggattctctt
attcgtcttgaatggagcgatgatggaaagtttgttgacaatcctacgcaaactgtgatt
tgtcgcaattttgctcagaagagcgtggacgctcagccgcaatttagtgcgcgcacaaac
gaaaatgaatggctggaagtcgaaactgaaaagcttcaccttacttataattgcgaagct
tttagcaaagaaggtttaagtattgttgtgcgcggagtgccgtgcacgcagtttaatacg
tggcattacggcgacgcgtgcccgggaaatcttcttggaacttttagaactttggatcag
gcgaatggcccggtaaaacttggtaaaggaatactttcgcgcgacggatggtctatttta
gacgattctgcaacttgcgaaattgctccggctgaggaaataaatggcaaaccaaacccg
tatggggcttgggttaagtcgcgtgcgcaaaaagttagcgagcaatcaggcagatacaag
gacttgtatttcttcggttatggacaccgctatattcaagcaattcaagacttttataag
cttacgggcgctcagccgctgctgccacgttttgcgctaagcaattggtggagccgctac
tatcgctaccgtcaagacgaatatttgcaattgcataatcgttttaagcgcgaaggcata
ccttttagcacggctgttattgacatggattggcatgtgactgatgttgatccgaagtat
ggatccggttggacgggctatacgtggaacgaggaacttttcccggatcatcgtgctttt
ttgcgtaaacttaacgctgctggattgtctccaactttgaacttgcatccgcgcgacggc
gtgcgtgcgtttgaaaaagattatccgcaagttgcgcaagatgctggcattgatccggca
agcggcaaagctgtggaatttgatttaacgaacccgcagtttgtgaaggcttacttcaac
atgcatcatcgtatggaagatgaaggtgtgcgattttggtggattgactggcagcagggg
ggagtgacgcgcgagcctggcttggatcctctttggatgctgaaccacatgcattatgag
gacgctgcgcgcgaaggtcgctggcctattacgttctctcgttatgctggccctggttcg
catcgctacccagttggattctcgggagataccgttactacttgggattcccttgctttc
caaacgtacttcacttctacagcttcaaatattggctacggatggtggagtcacgatatt
ggcggacacatgcttggcgttagaaataacgagttggaagcgcgatggtacgctttcggc
gcgtttagtcctattaatcgtttgcactcgacttgctcaccgtttgctggaaaagagccg
tggaatttccctcaggaaactcgcgaagcaatggtgaaaatgcttcgattgcgcgcggaa
ctcttgccatacgtttatacgatgaattatcgtgcagcttttgaaggcaggccgattatt
gagccaatgtactggcagtcgccggaagttggcatggcttacgaaattcctaacgaatac
cgttttggaagcgagcttatagtagcaccgattgtttcgtctaacgatgcggctgctttg
cgcggatgtgctggagtttggttgccggaaggcgattggtacgatttgtttgacggacgc
aggtatgtgtctcgctgctggaatggccgcagatttgaagcgtggcgttcacttgaccgc
gtgccggcttttgcgcgcgctggagcgattgtacctctgcaagttttgccggaagttgca
gattgcgagcgtagtgctgaggccgctgaatctgttaatagcattgaaaatccgcgggct
ttgcgagttcttgcattccctggagctgacggcgaatttgtgatgcgagaagataacggc
gattttgctgccgcgtctgctggaaatactgctaatacacgtatgaattttgtgtggcga
gacggcaatggttcttcgcaatttattatttccggtgttgcaggatgtgatgctgccgta
gaatctgtgccgcaaaaacgcaactggaacgttgtatttagaggagttgcttgcgcagat
tttgctcacgtgcgcgtgtttgttgggagccgagagcttaacgcaagcgagtttgcggtt
tcttacgaaggcgaagaggtgactttgagcttgtcggtttctgtgaaagacgtgccagct
cgttcggaagttcgcgtaattgttgacggtggattgcaaatcgctgccgaccctaaagtt
ggcgacgcttaccgattcctgcttcaagcgcaagtgccgtacagaggcaaggaaatggct
tttgatgcagtgcgagattctggcggaagtgcaagtgctattgctgaaatctcaactctt
gaatacgagaacgaatcggaagcagaaaagtatcgcaacagcgttgatatgcttaacgct
tacgcaaccgaccagccttccgtagttaagtgggcgcaatggcgttgcacactgcctgtt
tcggtaaagcacgcgcttgaggagattttgctgcgctcggttgagtaa
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