Gardnerella vaginalis 409-05: HMPREF0424_1291
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Entry
HMPREF0424_1291 CDS
T01146
Name
(GenBank) ABC transporter, solute-binding protein
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gva02000
]
HMPREF0424_1291
Transporters [BR:
gva02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
HMPREF0424_1291
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
IMS
Motif
Other DBs
NCBI-ProteinID:
ADB14022
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Position
complement(1541622..1543007)
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AA seq
461 aa
AA seq
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MNIRKMFISCVAVLGMLASVSACGSNSAGVTDTKKDKGLPVMGEALKYDPNHLVNQGKPI
ALEYWSWGDSSTDPIYDMIKQYTKIYPNVTFKTKNVAWDDYWTKLPLVLKGKSGPALFNI
HNSKDELIRPYSADYNVDKAAMEADYSSSVAHEDANGKVKYIDSVINTGNIYYNKKLWKE
AGLTEADIPTTWEELREVAKKLTKWNGSKMVQAGFNVNGDAYAAINQGLNYQRGELAFDK
SGKKPNFDNKITRENMQFLKNLYDKDKVIATDFGTDYTQSFGNGQSGMVYAWGWLEGLLK
EKYPNVEYGIFPTPTFTKETPFAYDRYNGESTPGINAHQSKEQQAVAQDFIKFILANDAF
IRSAVKHLNSFPAKKSLQNDPEILKAPVMAAIQPRVNRLIWPGITPSTVETSSKAAFQNV
MQNGQSIDSAVKEAQATMVKDMKNSNFKSAESKYEFFKEHK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcagaaaaatgtttatttcatgtgtcgccgttttaggcatgcttgctagtgtt
agcgcatgcggcagcaattctgccggtgtcaccgacacgaaaaaagacaaaggtttgccg
gtaatgggcgaggcattgaaatatgatcccaaccaccttgttaatcaaggcaagccaatt
gctttggaatattggagctggggagacagtagtaccgacccaatctacgatatgatcaag
cagtacacgaaaatctaccctaacgtaacgttcaaaacaaagaacgttgcttgggacgat
tattggacgaaactgccgttagtactcaaaggtaaaagcggtccggctctgttcaatatt
cacaattccaaggatgagcttatacgcccatactctgccgactacaacgttgacaaggca
gcaatggaagctgactacagctcctctgttgcacacgaagatgccaacggaaaagtaaag
tatattgactcggttatcaataccggcaatatttactacaataaaaagctttggaaagaa
gccggtttaacagaagcagatattcctacgacttgggaggagttacgcgaggtggcaaag
aaactcaccaagtggaacggttctaagatggtacaagccggtttcaacgttaatggtgac
gcatacgctgcaatcaaccaaggcttgaactatcaacgtggcgaacttgcgttcgataaa
agtggcaaaaagcctaactttgacaacaaaattacgcgcgaaaacatgcaattcctaaag
aatttgtacgacaaagacaaagttattgcaacagacttcggtactgattacacgcaaagt
tttggcaacggacaatccggaatggtatacgcttggggctggcttgaaggcctactgaaa
gaaaaatatccgaatgtagaatacggtattttcccaactccaacattcacgaaagaaacg
ccattcgcttatgatcgctacaacggcgaatctactccaggaatcaacgctcaccaaagc
aaagaacagcaagccgtggcacaagattttatcaagttcattctcgctaacgacgctttt
attcgctctgcagtgaaacatctgaactcgttcccagcgaagaaatcgctacagaacgat
ccagagattctcaaggccccggtaatggcggctattcagcctcgcgtgaataggttgatt
tggccaggcatcactccttctacggtggaaaccagcagcaaggcagcgttccaaaacgtt
atgcaaaatggtcaatctattgattccgcagtaaaagaagcacaggcgaccatggtaaaa
gacatgaagaattccaactttaagtctgcagaaagcaagtatgaattcttcaaagaacac
aagtaa
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