Gardnerella vaginalis 409-05: HMPREF0424_1295
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Entry
HMPREF0424_1295 CDS
T01146
Name
(GenBank) ABC transporter, solute-binding protein
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0424_1295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gva02000
]
HMPREF0424_1295
Transporters [BR:
gva02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
HMPREF0424_1295
BRITE hierarchy
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ADB13480
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All DBs
Position
1547335..1548564
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AA seq
409 aa
AA seq
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MTNIKKMLGAGLAVATLFGFAACGSSTNNSAKKAADSAPVQLTVWGSADDQKDGGWIKTV
EAEFKKENPNVTFKNAVVEPPDAAKAVKQDAKAAADVFLFPNDQLGDLVKAGAIGELSDD
ATKQVKEQNEDTLIKSVTAQDGKLYGVPYTGNTWFMYYNKSKFSADDVKSLDKMLEKGKV
SFDLANAWYLPGFYLDGNMTLFGENGNDAKAGMKLSDKAAEVTKYIATKLVGNEKHFVLD
GNGRGLAGLKDGSVDAMFSGSWDAAKVKDALKDNYAAAALPTFKTESGEHQMKSFAGSKA
VAYNTNTKSPEMAAKFAAFLGSKKSQQIAFEKEGAIPSDKSLADSVKAEPAAVAQMETIA
KTSVLQPAIPEMGKFWDPVQAFGTSISTGKITGDNAAAQTAEFAKGLEK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatattaagaagatgctgggtgcaggtcttgcagttgctactttgtttggattt
gcagcttgcggttcaagcactaacaatagcgctaagaaggctgctgattcagcacctgtt
cagctcaccgtttggggttctgctgacgatcagaaagatggcggctggattaagactgtt
gaagcagaattcaagaaggaaaatccaaacgttactttcaagaacgctgttgttgagcca
ccagacgctgctaaggctgttaagcaggatgctaaggctgctgctgatgtgttcctcttc
cctaacgatcagctcggcgacttggtaaaggctggagcaatcggcgaattaagcgatgac
gccacaaagcaagttaaggaacagaacgaagatactttgatcaagtctgttaccgctcag
gacggtaaactttacggcgttccttacaccggcaacacttggttcatgtactacaacaag
tccaagttctccgctgatgacgttaagtccctcgacaagatgcttgaaaagggcaaggtt
tcattcgatcttgctaatgcttggtatctcccaggcttctacctcgatggcaatatgacg
ctcttcggcgaaaatggaaacgatgctaaggctggcatgaagctcagtgataaggctgct
gaagttaccaagtacattgcaacaaagctcgttggaaacgaaaagcacttcgtacttgat
ggaaatggtcgcggcttggctggcttgaaggacggctccgttgatgcaatgttctccggt
tcttgggatgcagccaaggttaaggacgccttgaaggataactatgctgcagctgctctt
ccaaccttcaagactgagtctggcgagcaccagatgaagtccttcgctggttctaaggct
gttgcttacaacaccaacaccaagtctccagagatggctgctaagttcgctgcattcttg
ggctccaagaagtcccagcagattgctttcgaaaaggaaggtgcaattccttctgacaag
tcccttgctgatagcgtaaaggcagagccagctgctgttgctcagatggaaaccattgct
aagacttctgtcttgcagccagcaattcctgaaatgggtaagttctgggatccagttcaa
gcattcggcacttctatctccaccggtaagattactggcgataatgctgccgcgcagacc
gcagaatttgctaagggcttagagaagtaa
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