Gardnerella vaginalis 409-05: HMPREF0424_1297
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Entry
HMPREF0424_1297 CDS
T01146
Name
(GenBank) ABC transporter, permease protein
KO
K15772
arabinogalactan oligomer / maltooligosaccharide transport system permease protein
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0424_1297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gva02000
]
HMPREF0424_1297
Transporters [BR:
gva02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
HMPREF0424_1297
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
SPC25
Claudin_2
Motif
Other DBs
NCBI-ProteinID:
ADB13947
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Position
1550127..1551050
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AA seq
307 aa
AA seq
DB search
MSDKTTTKNEEAVVKSTRSVSFLKDQHVRRVIGDTFSHLFLLVLSVIWLIPILWVLLESF
NKNTGSYQKTFFPTEYSLNNYIKLFTDTDDINFPRMFLNTLIVSIFVCIISLVFVLAVSF
CMSRLRFKGRKTFMNLALILGMFPGIMAVIAIYFILKALGLTKGSIVLIALIIVYSAGSG
AGFYIMKGYMDTIPKSLDEAAYLDGCTKWQVFWKIIVPICKPMIVFQAITGFLGPWLDFV
MVKTVVRDNKENYTVAYGLMEMLTKKYLPDWYAAFAAGAVCISIPIVILFIIMQRFYEES
MSGSVKG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgataaaactacaactaagaacgaagaagctgttgtaaagagcactcgtagtgtt
tctttccttaaagatcaacatgtcagaagagtaattggagatactttctcacatttgttc
ttgctggtgttgtcagttatttggctgattccaatcttgtgggttttgttagaaagcttc
aacaagaacactggttcctatcagaaaaccttcttcccaactgaatactcactaaataac
tatataaagttatttaccgataccgatgacattaatttcccacgaatgttcctcaacact
ttgatcgtgtcaattttcgtgtgcattatttctttggtgtttgtgttagcagtgtccttc
tgcatgtctcgtctccgtttcaaagggcgcaagacattcatgaatcttgctctgattctt
ggtatgttcccaggtatcatggctgttattgctatctacttcattttgaaggctcttggt
ttaacaaaaggttcgattgtattaatcgcacttattatcgtttattctgcaggtagcggt
gctggcttctacattatgaagggctacatggatactattccaaagtctttggatgaagct
gcatacttggatggatgcacaaagtggcaagtattctggaagattattgttccaatctgc
aagcctatgattgtattccaagcaattactggattcttgggaccatggctagacttcgtt
atggtgaagacagtagtgagagacaataaggaaaactacacagttgcttacggattaatg
gagatgcttaccaaaaagtatctacctgattggtacgctgcattcgcggcaggtgctgtg
tgcatttccataccaatcgtaatcctgttcattattatgcagcgcttctacgaagagtcc
atgtctggctccgttaaaggctga
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