Gardnerella vaginalis 409-05: HMPREF0424_1311
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Entry
HMPREF0424_1311 CDS
T01146
Name
(GenBank) DNA-binding helix-turn-helix protein
KO
K14260
alanine-synthesizing transaminase [EC:
2.6.1.66
2.6.1.2
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00220
Arginine biosynthesis
gva00250
Alanine, aspartate and glutamate metabolism
gva00290
Valine, leucine and isoleucine biosynthesis
gva01100
Metabolic pathways
gva01110
Biosynthesis of secondary metabolites
gva01210
2-Oxocarboxylic acid metabolism
gva01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HMPREF0424_1311
00290 Valine, leucine and isoleucine biosynthesis
HMPREF0424_1311
00220 Arginine biosynthesis
HMPREF0424_1311
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gva01007
]
HMPREF0424_1311
Enzymes [BR:
gva01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.2 alanine transaminase
HMPREF0424_1311
2.6.1.66 valine---pyruvate transaminase
HMPREF0424_1311
Amino acid related enzymes [BR:
gva01007
]
Aminotransferase (transaminase)
Class I
HMPREF0424_1311
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
HTH_3
Beta_elim_lyase
Mre11_acc_DNA_cap
HTH_19
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ADB13803
LinkDB
All DBs
Position
1566274..1567800
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AA seq
508 aa
AA seq
DB search
MAQNFADELKKAMKRKGYKQIDVIELAAKNGHKLGKSQLSQYLSGKTEPRKDVRNMLAEI
LGISSDGIKGGHSCAKIEQNCQSAEEPQLNQPQLTEAELSQTLKHRTFNKSTKLEHVLYD
VRGPVVEEANRMEANGTHILKLNIGNPAPFGFRAPDEVIYDMQQQLIDCEGYSDSRGLFS
ARKAIMQYDQLKGIPGVQMEDIYTGNGVSELINLSMQALLDCGDEILIPSPDYPLWTACA
SLAGGTPVHYMCDEKSHWYPDIADIRSKITPRTKAIVIINPNNPTGVLYSREVLEEIVKI
AREFNLIIFADEIYDRLVMDGKKHISIASLAPDVFCVTFSGLSKSHMIAGFRIGWMSLSG
DKSKARDYIMGLNMLSNMRLCSNVPAQSIIQTALGGYQSVEKYLEPGGRVYEQREYCYNA
LQEMDGVSVERPDAAFYMFVKLDPSRYNIHDDEQFALDLLRDQKLLIVHGKGFNWQTPGY
FRVVYLPRLQTLRDAMGKLANFLSYYRQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaattttgctgatgagcttaaaaaagctatgaagcgtaaggggtacaagcag
attgacgtaatcgagcttgcagcaaaaaacggtcataaacttggtaaaagccagttaagc
cagtatttaagcggcaaaaccgagcctcgcaaagacgtacgtaacatgctagctgaaatt
cttggaatcagcagcgacggaatcaaaggcggtcattcttgtgcaaaaatcgagcaaaac
tgccagtctgcagaagaaccacaattaaatcagccacagcttacagaagctgaactttcc
caaacactcaaacatagaaccttcaacaaatcaaccaaactcgagcacgtgctttatgac
gttcgcggcccagttgttgaagaagcaaaccgcatggaagcgaacggaacgcatattcta
aagctcaacattggaaatcctgcgcctttcggattccgcgctccagacgaagtgatttac
gacatgcaacagcagcttattgactgcgaaggctactcggatagtcgtggacttttctcc
gctcgcaaggcgattatgcaatacgatcagcttaagggcattccaggcgtgcaaatggaa
gatatttacactggaaacggagtttccgagctgattaatctttctatgcaagcgctgctt
gattgcggcgacgagattcttatcccaagcccagactatccgttgtggactgcgtgcgct
agcctggctggaggtactcctgtgcactacatgtgtgacgaaaagtcgcattggtaccca
gatattgccgacattcgctctaaaatcacgcctcgcactaaagcaatcgtgattattaac
ccgaataatcctacgggtgtgctgtatagtcgcgaagttttggaagagattgttaagatt
gcgcgcgagtttaatttgattatttttgcggacgagatttacgaccgtcttgttatggat
ggcaagaagcatatttcgattgcttctcttgctccagacgtattctgcgtaactttcagc
ggactttctaagtcgcatatgattgctggcttccgtattggttggatgagtctttcggga
gataaatccaaggctcgcgactacattatgggtcttaatatgctgtctaatatgcgcttg
tgctcgaacgttcctgcgcagtcaattattcagactgctttgggcggataccagagcgtt
gaaaagtatttggaaccaggcggacgcgtgtatgagcagcgcgagtattgctataacgcg
cttcaagagatggatggcgtaagcgttgagcgaccagacgctgctttctacatgtttgta
aagctcgatccaagtcgatacaacattcacgacgacgaacagtttgcgcttgatttgcta
cgcgatcagaagttgctgattgtgcacggcaaaggctttaattggcagactccaggctac
ttccgcgtagtctacttgccgcgcttgcaaacgcttcgtgacgcaatgggcaaactcgct
aacttcctctcctactatcgccagtag
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